fast.genomicscompare 6,575 genera of bacteria & archaea

 

16-39-46 sp018242545 SZAS-1

Genome identifier: GCA_018242545.1

NCBI assembly name: ASM1824254v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, 16-39-46, 16-39-46, 16-39-46, 16-39-46 sp018242545

NCBI taxonomy: Bacteria, Pseudomonadota

Scaffolds: 122

Genes: 1,784 Protein-coding: 1,685 RNAs: 67 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAFEBT010000001.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__1__length-100937, whole genome shotgun sequence 100,937
JAFEBT010000002.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__2__length-73784, whole genome shotgun sequence 73,784
JAFEBT010000003.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__3__length-62553, whole genome shotgun sequence 62,553
JAFEBT010000004.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__4__length-54793, whole genome shotgun sequence 54,793
JAFEBT010000005.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__5__length-53742, whole genome shotgun sequence 53,742
JAFEBT010000006.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__6__length-47467, whole genome shotgun sequence 47,467
JAFEBT010000007.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__7__length-45119, whole genome shotgun sequence 45,119
JAFEBT010000008.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__8__length-42514, whole genome shotgun sequence 42,514
JAFEBT010000009.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__9__length-39434, whole genome shotgun sequence 39,434
JAFEBT010000010.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__10__length-37798, whole genome shotgun sequence 37,798
JAFEBT010000011.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__11__length-36990, whole genome shotgun sequence 36,990
JAFEBT010000012.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__12__length-36776, whole genome shotgun sequence 36,776
JAFEBT010000013.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__13__length-31507, whole genome shotgun sequence 31,507
JAFEBT010000014.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__14__length-31480, whole genome shotgun sequence 31,480
JAFEBT010000015.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__15__length-31343, whole genome shotgun sequence 31,343
JAFEBT010000016.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__16__length-30004, whole genome shotgun sequence 30,004
JAFEBT010000017.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__17__length-29875, whole genome shotgun sequence 29,875
JAFEBT010000018.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__18__length-29757, whole genome shotgun sequence 29,757
JAFEBT010000019.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__19__length-25738, whole genome shotgun sequence 25,738
JAFEBT010000020.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__20__length-25266, whole genome shotgun sequence 25,266
JAFEBT010000021.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__21__length-25052, whole genome shotgun sequence 25,052
JAFEBT010000022.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__22__length-23431, whole genome shotgun sequence 23,431
JAFEBT010000023.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__23__length-23404, whole genome shotgun sequence 23,404
JAFEBT010000024.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__24__length-23366, whole genome shotgun sequence 23,366
JAFEBT010000025.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__25__length-23353, whole genome shotgun sequence 23,353
JAFEBT010000026.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__26__length-23183, whole genome shotgun sequence 23,183
JAFEBT010000027.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__27__length-22220, whole genome shotgun sequence 22,220
JAFEBT010000028.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__28__length-22173, whole genome shotgun sequence 22,173
JAFEBT010000029.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__29__length-21619, whole genome shotgun sequence 21,619
JAFEBT010000030.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__30__length-21255, whole genome shotgun sequence 21,255
JAFEBT010000031.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__31__length-20498, whole genome shotgun sequence 20,498
JAFEBT010000032.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__32__length-20355, whole genome shotgun sequence 20,355
JAFEBT010000033.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__33__length-19919, whole genome shotgun sequence 19,919
JAFEBT010000034.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__34__length-19809, whole genome shotgun sequence 19,809
JAFEBT010000035.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__35__length-18684, whole genome shotgun sequence 18,684
JAFEBT010000036.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__36__length-18600, whole genome shotgun sequence 18,600
JAFEBT010000037.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__37__length-18252, whole genome shotgun sequence 18,252
JAFEBT010000038.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__38__length-17811, whole genome shotgun sequence 17,811
JAFEBT010000039.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__39__length-17775, whole genome shotgun sequence 17,775
JAFEBT010000040.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__40__length-17399, whole genome shotgun sequence 17,399
JAFEBT010000041.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__41__length-16478, whole genome shotgun sequence 16,478
JAFEBT010000042.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__42__length-16409, whole genome shotgun sequence 16,409
JAFEBT010000043.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__43__length-16225, whole genome shotgun sequence 16,225
JAFEBT010000044.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__44__length-15807, whole genome shotgun sequence 15,807
JAFEBT010000045.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__45__length-15675, whole genome shotgun sequence 15,675
JAFEBT010000046.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__46__length-15566, whole genome shotgun sequence 15,566
JAFEBT010000047.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__47__length-15550, whole genome shotgun sequence 15,550
JAFEBT010000048.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__48__length-15130, whole genome shotgun sequence 15,130
JAFEBT010000049.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__49__length-14796, whole genome shotgun sequence 14,796
JAFEBT010000050.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__50__length-14724, whole genome shotgun sequence 14,724
JAFEBT010000051.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__51__length-14604, whole genome shotgun sequence 14,604
JAFEBT010000052.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__52__length-14519, whole genome shotgun sequence 14,519
JAFEBT010000053.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__53__length-14305, whole genome shotgun sequence 14,305
JAFEBT010000054.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__54__length-13882, whole genome shotgun sequence 13,882
JAFEBT010000055.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__55__length-13806, whole genome shotgun sequence 13,806
JAFEBT010000056.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__56__length-13727, whole genome shotgun sequence 13,727
JAFEBT010000057.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__57__length-13501, whole genome shotgun sequence 13,501
JAFEBT010000058.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__58__length-13195, whole genome shotgun sequence 13,195
JAFEBT010000059.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__59__length-12662, whole genome shotgun sequence 12,662
JAFEBT010000060.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__60__length-12587, whole genome shotgun sequence 12,587
JAFEBT010000061.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__61__length-11696, whole genome shotgun sequence 11,696
JAFEBT010000062.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__62__length-11473, whole genome shotgun sequence 11,473
JAFEBT010000063.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__63__length-10951, whole genome shotgun sequence 10,951
JAFEBT010000064.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__64__length-10132, whole genome shotgun sequence 10,132
JAFEBT010000065.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__65__length-10111, whole genome shotgun sequence 10,111
JAFEBT010000066.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__66__length-10105, whole genome shotgun sequence 10,105
JAFEBT010000067.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__67__length-9688, whole genome shotgun sequence 9,688
JAFEBT010000068.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__68__length-9630, whole genome shotgun sequence 9,630
JAFEBT010000069.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__69__length-9508, whole genome shotgun sequence 9,508
JAFEBT010000070.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__70__length-9057, whole genome shotgun sequence 9,057
JAFEBT010000071.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__71__length-8847, whole genome shotgun sequence 8,847
JAFEBT010000072.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__72__length-8780, whole genome shotgun sequence 8,780
JAFEBT010000073.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__73__length-8374, whole genome shotgun sequence 8,374
JAFEBT010000074.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__74__length-8325, whole genome shotgun sequence 8,325
JAFEBT010000075.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__75__length-8039, whole genome shotgun sequence 8,039
JAFEBT010000076.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__76__length-7721, whole genome shotgun sequence 7,721
JAFEBT010000077.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__77__length-7672, whole genome shotgun sequence 7,672
JAFEBT010000078.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__78__length-7667, whole genome shotgun sequence 7,667
JAFEBT010000079.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__79__length-7602, whole genome shotgun sequence 7,602
JAFEBT010000080.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__80__length-7508, whole genome shotgun sequence 7,508
JAFEBT010000081.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__81__length-7144, whole genome shotgun sequence 7,144
JAFEBT010000082.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__82__length-6690, whole genome shotgun sequence 6,690
JAFEBT010000083.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__83__length-6372, whole genome shotgun sequence 6,372
JAFEBT010000084.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__84__length-6232, whole genome shotgun sequence 6,232
JAFEBT010000085.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__85__length-5976, whole genome shotgun sequence 5,976
JAFEBT010000086.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__86__length-5796, whole genome shotgun sequence 5,796
JAFEBT010000087.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__87__length-5625, whole genome shotgun sequence 5,625
JAFEBT010000088.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__88__length-5472, whole genome shotgun sequence 5,472
JAFEBT010000089.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__89__length-5426, whole genome shotgun sequence 5,426
JAFEBT010000090.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__90__length-5312, whole genome shotgun sequence 5,312
JAFEBT010000091.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__91__length-5311, whole genome shotgun sequence 5,311
JAFEBT010000092.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__92__length-4993, whole genome shotgun sequence 4,993
JAFEBT010000093.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__93__length-4839, whole genome shotgun sequence 4,839
JAFEBT010000094.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__94__length-4589, whole genome shotgun sequence 4,589
JAFEBT010000095.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__95__length-4471, whole genome shotgun sequence 4,471
JAFEBT010000096.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__96__length-4259, whole genome shotgun sequence 4,259
JAFEBT010000097.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__97__length-4229, whole genome shotgun sequence 4,229
JAFEBT010000098.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__98__length-3737, whole genome shotgun sequence 3,737
JAFEBT010000099.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__99__length-3683, whole genome shotgun sequence 3,683
JAFEBT010000100.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__100__length-3399, whole genome shotgun sequence 3,399
JAFEBT010000101.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__101__length-3089, whole genome shotgun sequence 3,089
JAFEBT010000102.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__102__length-2929, whole genome shotgun sequence 2,929
JAFEBT010000103.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__103__length-2818, whole genome shotgun sequence 2,818
JAFEBT010000104.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__104__length-2766, whole genome shotgun sequence 2,766
JAFEBT010000105.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__105__length-2607, whole genome shotgun sequence 2,607
JAFEBT010000106.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__106__length-2596, whole genome shotgun sequence 2,596
JAFEBT010000107.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__107__length-2548, whole genome shotgun sequence 2,548
JAFEBT010000108.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__108__length-2526, whole genome shotgun sequence 2,526
JAFEBT010000109.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__109__length-2488, whole genome shotgun sequence 2,488
JAFEBT010000110.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__110__length-2415, whole genome shotgun sequence 2,415
JAFEBT010000111.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__111__length-2379, whole genome shotgun sequence 2,379
JAFEBT010000112.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__112__length-2307, whole genome shotgun sequence 2,307
JAFEBT010000113.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__113__length-1739, whole genome shotgun sequence 1,739
JAFEBT010000114.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__114__length-1702, whole genome shotgun sequence 1,702
JAFEBT010000115.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__115__length-1702, whole genome shotgun sequence 1,702
JAFEBT010000116.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__116__length-1637, whole genome shotgun sequence 1,637
JAFEBT010000117.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__117__length-1608, whole genome shotgun sequence 1,608
JAFEBT010000118.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__118__length-1560, whole genome shotgun sequence 1,560
JAFEBT010000119.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__119__length-1500, whole genome shotgun sequence 1,500
JAFEBT010000120.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__120__length-1411, whole genome shotgun sequence 1,411
JAFEBT010000121.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__121__length-1303, whole genome shotgun sequence 1,303
JAFEBT010000122.1 MAG: Proteobacteria bacterium isolate SZAS-1 LIN-511__122__length-1120, whole genome shotgun sequence 1,120

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory