fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGTRE01 sp018396415 JZ-2_2_bin_159

Genome identifier: GCA_018396415.1

NCBI assembly name: ASM1839641v1

GTDB taxonomy: Archaea, Thermoproteota, Bathyarchaeia, RBG-16-48-13, JAGTRE01, JAGTRE01, JAGTRE01 sp018396415

NCBI taxonomy: Archaea, Candidatus Bathyarchaeota

Scaffolds: 30

Genes: 1,515 Protein-coding: 1,453 RNAs: 50 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGTRE010000001.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_1, whole genome shotgun sequence 182,076
JAGTRE010000002.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_2, whole genome shotgun sequence 175,295
JAGTRE010000003.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_3, whole genome shotgun sequence 147,909
JAGTRE010000004.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_4, whole genome shotgun sequence 135,338
JAGTRE010000005.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_5, whole genome shotgun sequence 88,046
JAGTRE010000006.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_6, whole genome shotgun sequence 81,035
JAGTRE010000007.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_7, whole genome shotgun sequence 73,944
JAGTRE010000008.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_8, whole genome shotgun sequence 66,858
JAGTRE010000009.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_9, whole genome shotgun sequence 56,193
JAGTRE010000010.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_10, whole genome shotgun sequence 49,787
JAGTRE010000011.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_11, whole genome shotgun sequence 40,766
JAGTRE010000012.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_12, whole genome shotgun sequence 36,122
JAGTRE010000013.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_13, whole genome shotgun sequence 30,919
JAGTRE010000014.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_14, whole genome shotgun sequence 28,965
JAGTRE010000015.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_15, whole genome shotgun sequence 28,573
JAGTRE010000016.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_16, whole genome shotgun sequence 24,625
JAGTRE010000017.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_17, whole genome shotgun sequence 23,589
JAGTRE010000018.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_19, whole genome shotgun sequence 18,059
JAGTRE010000019.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_20, whole genome shotgun sequence 17,858
JAGTRE010000020.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_21, whole genome shotgun sequence 15,749
JAGTRE010000021.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_22, whole genome shotgun sequence 15,452
JAGTRE010000022.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_25, whole genome shotgun sequence 9,297
JAGTRE010000023.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_26, whole genome shotgun sequence 7,642
JAGTRE010000024.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_29, whole genome shotgun sequence 7,141
JAGTRE010000025.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_30, whole genome shotgun sequence 6,416
JAGTRE010000026.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_33, whole genome shotgun sequence 4,370
JAGTRE010000027.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_34, whole genome shotgun sequence 4,329
JAGTRE010000028.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_35, whole genome shotgun sequence 3,271
JAGTRE010000029.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_37, whole genome shotgun sequence 3,085
JAGTRE010000030.1 MAG: Candidatus Bathyarchaeota archaeon isolate JZ-2_2_bin_159 JZ-2_2_bin_159_NODE_39, whole genome shotgun sequence 2,853

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory