fast.genomicscompare 6,575 genera of bacteria & archaea

 

DTDX01 sp018396815 DRTY-6_2_bin_141

Genome identifier: GCA_018396815.1

NCBI assembly name: ASM1839681v1

GTDB taxonomy: Archaea, Thermoproteota, Bathyarchaeia, 40CM-2-53-6, DTDX01, DTDX01, DTDX01 sp018396815

NCBI taxonomy: Archaea, Candidatus Bathyarchaeota

Scaffolds: 12

Genes: 1,606 Protein-coding: 1,540 RNAs: 50 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGTQY010000001.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_1, whole genome shotgun sequence 623,330
JAGTQY010000002.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_2, whole genome shotgun sequence 354,801
JAGTQY010000003.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_3, whole genome shotgun sequence 160,989
JAGTQY010000004.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_4, whole genome shotgun sequence 123,061
JAGTQY010000005.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_5, whole genome shotgun sequence 72,264
JAGTQY010000006.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_6, whole genome shotgun sequence 44,306
JAGTQY010000007.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_7, whole genome shotgun sequence 44,254
JAGTQY010000008.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_8, whole genome shotgun sequence 32,279
JAGTQY010000009.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_9, whole genome shotgun sequence 14,951
JAGTQY010000010.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_10, whole genome shotgun sequence 7,136
JAGTQY010000011.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_11, whole genome shotgun sequence 5,556
JAGTQY010000012.1 MAG: Candidatus Bathyarchaeota archaeon isolate DRTY-6_2_bin_141 DRTY-6_2_bin_141_NODE_13, whole genome shotgun sequence 2,856

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory