fast.genomicscompare 6,575 genera of bacteria & archaea

 

KMM-3653 sp018524345 KMM 3653

Genome identifier: GCA_018524345.1

NCBI assembly name: ASM1852434v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, KMM-3653, KMM-3653 sp018524345

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 9

Genes: 3,851 Protein-coding: 3,785 RNAs: 50 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADQAZ010000001.1 Harenicola maris strain KMM 3653 NODE_1_length_1653092_cov_25.426114, whole genome shotgun sequence 1,653,092
JADQAZ010000002.1 Harenicola maris strain KMM 3653 NODE_2_length_1228671_cov_27.441521, whole genome shotgun sequence 1,228,671
JADQAZ010000003.1 Harenicola maris strain KMM 3653 NODE_3_length_780823_cov_26.163077, whole genome shotgun sequence 780,823
JADQAZ010000004.1 Harenicola maris strain KMM 3653 NODE_4_length_277181_cov_26.998250, whole genome shotgun sequence 277,181
JADQAZ010000005.1 Harenicola maris strain KMM 3653 NODE_5_length_58484_cov_25.847604, whole genome shotgun sequence 58,484
JADQAZ010000006.1 Harenicola maris strain KMM 3653 NODE_6_length_554_cov_35.215933, whole genome shotgun sequence 554
JADQAZ010000007.1 Harenicola maris strain KMM 3653 NODE_7_length_554_cov_33.903564, whole genome shotgun sequence 554
JADQAZ010000008.1 Harenicola maris strain KMM 3653 NODE_8_length_502_cov_63.861176, whole genome shotgun sequence 502
JADQAZ010000009.1 Harenicola maris strain KMM 3653 NODE_9_length_283_cov_48.101942, whole genome shotgun sequence 283

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory