fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAIJMQ01 sp018812925 Modern_marine.mb.319

Genome identifier: GCA_018812925.1

NCBI assembly name: ASM1881292v1

GTDB taxonomy: Bacteria, CAIJMQ01, CAIJMQ01, CAIJMQ01, CAIJMQ01, CAIJMQ01, CAIJMQ01 sp018812925

NCBI taxonomy: Bacteria, Candidatus Omnitrophota

Scaffolds: 14

Genes: 1,471 Protein-coding: 1,415 RNAs: 53 pseudogenes: 3

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAHJCU010000001.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_39408, whole genome shotgun sequence 39,366
JAHJCU010000002.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_227071, whole genome shotgun sequence 84,989
JAHJCU010000003.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_435252, whole genome shotgun sequence 234,435
JAHJCU010000004.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_456503, whole genome shotgun sequence 593,440
JAHJCU010000005.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_595170, whole genome shotgun sequence 271,705
JAHJCU010000006.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_1137530, whole genome shotgun sequence 20,950
JAHJCU010000007.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_1180732, whole genome shotgun sequence 11,922
JAHJCU010000008.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_1193875, whole genome shotgun sequence 164,969
JAHJCU010000009.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_1490431, whole genome shotgun sequence 2,500
JAHJCU010000010.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_2327237, whole genome shotgun sequence 15,212
JAHJCU010000011.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_2327983, whole genome shotgun sequence 5,096
JAHJCU010000012.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_495672, whole genome shotgun sequence 10,925
JAHJCU010000013.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_588250, whole genome shotgun sequence 3,363
JAHJCU010000014.1 MAG: Candidatus Omnitrophota bacterium isolate Modern_marine.mb.319 Modern_marine.mb.319_k141_1183836, whole genome shotgun sequence 11,547

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory