fast.genomicscompare 6,575 genera of bacteria & archaea

 

REEB506 sp018969015 REEB506

Genome identifier: GCA_018969015.1

NCBI assembly name: ASM1896901v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, TH1-2, REEB506, REEB506 sp018969015

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 69

Genes: 3,333 Protein-coding: 3,276 RNAs: 51 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGWZE010000001.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_30, whole genome shotgun sequence 208,751
JAGWZE010000002.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_34, whole genome shotgun sequence 202,133
JAGWZE010000003.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_49, whole genome shotgun sequence 180,406
JAGWZE010000004.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_104, whole genome shotgun sequence 140,751
JAGWZE010000005.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_120, whole genome shotgun sequence 134,423
JAGWZE010000006.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_128, whole genome shotgun sequence 129,813
JAGWZE010000007.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_176, whole genome shotgun sequence 115,522
JAGWZE010000008.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_198, whole genome shotgun sequence 109,979
JAGWZE010000009.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_202, whole genome shotgun sequence 109,779
JAGWZE010000010.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_252, whole genome shotgun sequence 98,812
JAGWZE010000011.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_275, whole genome shotgun sequence 96,281
JAGWZE010000012.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_292, whole genome shotgun sequence 94,330
JAGWZE010000013.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_342, whole genome shotgun sequence 87,286
JAGWZE010000014.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_360, whole genome shotgun sequence 85,771
JAGWZE010000015.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_435, whole genome shotgun sequence 78,108
JAGWZE010000016.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_467, whole genome shotgun sequence 76,272
JAGWZE010000017.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_522, whole genome shotgun sequence 71,417
JAGWZE010000018.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_546, whole genome shotgun sequence 70,105
JAGWZE010000019.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_579, whole genome shotgun sequence 68,047
JAGWZE010000020.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_617, whole genome shotgun sequence 66,395
JAGWZE010000021.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_751, whole genome shotgun sequence 60,393
JAGWZE010000022.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_766, whole genome shotgun sequence 59,826
JAGWZE010000023.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_814, whole genome shotgun sequence 57,936
JAGWZE010000024.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1001, whole genome shotgun sequence 52,035
JAGWZE010000025.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1022, whole genome shotgun sequence 51,565
JAGWZE010000026.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1120, whole genome shotgun sequence 48,512
JAGWZE010000027.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1230, whole genome shotgun sequence 46,337
JAGWZE010000028.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1231, whole genome shotgun sequence 46,320
JAGWZE010000029.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1255, whole genome shotgun sequence 45,866
JAGWZE010000030.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1311, whole genome shotgun sequence 44,933
JAGWZE010000031.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1357, whole genome shotgun sequence 44,130
JAGWZE010000032.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1644, whole genome shotgun sequence 39,861
JAGWZE010000033.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1741, whole genome shotgun sequence 38,717
JAGWZE010000034.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1850, whole genome shotgun sequence 37,289
JAGWZE010000035.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_1861, whole genome shotgun sequence 37,169
JAGWZE010000036.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_2349, whole genome shotgun sequence 32,366
JAGWZE010000037.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_2504, whole genome shotgun sequence 31,177
JAGWZE010000038.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_2593, whole genome shotgun sequence 30,493
JAGWZE010000039.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_2955, whole genome shotgun sequence 28,022
JAGWZE010000040.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_3158, whole genome shotgun sequence 26,850
JAGWZE010000041.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_3193, whole genome shotgun sequence 26,596
JAGWZE010000042.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_3263, whole genome shotgun sequence 26,185
JAGWZE010000043.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_3289, whole genome shotgun sequence 26,066
JAGWZE010000044.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_4052, whole genome shotgun sequence 22,724
JAGWZE010000045.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_5458, whole genome shotgun sequence 18,590
JAGWZE010000046.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_6418, whole genome shotgun sequence 16,477
JAGWZE010000047.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_7581, whole genome shotgun sequence 14,605
JAGWZE010000048.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_8100, whole genome shotgun sequence 13,865
JAGWZE010000049.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_9886, whole genome shotgun sequence 11,924
JAGWZE010000050.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_10558, whole genome shotgun sequence 11,317
JAGWZE010000051.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_11296, whole genome shotgun sequence 10,710
JAGWZE010000052.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_11605, whole genome shotgun sequence 10,471
JAGWZE010000053.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_12532, whole genome shotgun sequence 9,843
JAGWZE010000054.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_12705, whole genome shotgun sequence 9,738
JAGWZE010000055.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_12980, whole genome shotgun sequence 9,554
JAGWZE010000056.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_13357, whole genome shotgun sequence 9,355
JAGWZE010000057.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_17468, whole genome shotgun sequence 7,555
JAGWZE010000058.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_19987, whole genome shotgun sequence 6,759
JAGWZE010000059.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_20103, whole genome shotgun sequence 6,729
JAGWZE010000060.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_20923, whole genome shotgun sequence 6,504
JAGWZE010000061.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_20971, whole genome shotgun sequence 6,493
JAGWZE010000062.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_22380, whole genome shotgun sequence 6,172
JAGWZE010000063.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_22702, whole genome shotgun sequence 6,101
JAGWZE010000064.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_25848, whole genome shotgun sequence 5,490
JAGWZE010000065.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_31723, whole genome shotgun sequence 4,664
JAGWZE010000066.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_47526, whole genome shotgun sequence 3,382
JAGWZE010000067.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_69495, whole genome shotgun sequence 2,502
JAGWZE010000068.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_94245, whole genome shotgun sequence 1,961
JAGWZE010000069.1 MAG: Alphaproteobacteria bacterium isolate REEB506 contig-150_128234, whole genome shotgun sequence 1,533

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory