fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFAZJ01 sp019635875 ACE_PRO25

Genome identifier: GCA_019635875.1

NCBI assembly name: ASM1963587v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Reyranellales, Reyranellaceae, JAFAZJ01, JAFAZJ01 sp019635875

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria

Scaffolds: 17

Genes: 6,132 Protein-coding: 6,029 RNAs: 59 pseudogenes: 44

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAHBYP010000001.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_1, whole genome shotgun sequence 1,228,976
JAHBYP010000002.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_2, whole genome shotgun sequence 1,058,753
JAHBYP010000003.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_3, whole genome shotgun sequence 732,443
JAHBYP010000004.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_4, whole genome shotgun sequence 629,700
JAHBYP010000005.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_5, whole genome shotgun sequence 601,686
JAHBYP010000006.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_6, whole genome shotgun sequence 342,235
JAHBYP010000007.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_7, whole genome shotgun sequence 287,012
JAHBYP010000008.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_8, whole genome shotgun sequence 280,003
JAHBYP010000009.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_9, whole genome shotgun sequence 238,223
JAHBYP010000010.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_10, whole genome shotgun sequence 167,778
JAHBYP010000011.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_11, whole genome shotgun sequence 149,723
JAHBYP010000012.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_12, whole genome shotgun sequence 149,655
JAHBYP010000013.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_13, whole genome shotgun sequence 144,848
JAHBYP010000014.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_14, whole genome shotgun sequence 85,692
JAHBYP010000015.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_15, whole genome shotgun sequence 70,349
JAHBYP010000016.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_16, whole genome shotgun sequence 44,309
JAHBYP010000017.1 MAG: Alphaproteobacteria bacterium isolate ACE_PRO25 PRO25_17, whole genome shotgun sequence 1,642

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory