fast.genomicscompare 6,575 genera of bacteria & archaea

 

JADJRI01 sp019636475 ACE_PLA21

Genome identifier: GCA_019636475.1

NCBI assembly name: ASM1963647v1

GTDB taxonomy: Bacteria, Planctomycetota, Phycisphaerae, UBA1845, UTPLA1, JADJRI01, JADJRI01 sp019636475

NCBI taxonomy: Bacteria, Planctomycetota, Phycisphaerae

Scaffolds: 18

Genes: 3,439 Protein-coding: 3,368 RNAs: 53 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAHBXN010000001.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_1, whole genome shotgun sequence 819,219
JAHBXN010000002.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_2, whole genome shotgun sequence 650,825
JAHBXN010000003.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_3, whole genome shotgun sequence 504,978
JAHBXN010000004.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_4, whole genome shotgun sequence 471,072
JAHBXN010000005.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_5, whole genome shotgun sequence 402,061
JAHBXN010000006.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_6, whole genome shotgun sequence 334,070
JAHBXN010000007.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_7, whole genome shotgun sequence 267,024
JAHBXN010000008.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_8, whole genome shotgun sequence 184,377
JAHBXN010000009.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_9, whole genome shotgun sequence 137,169
JAHBXN010000010.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_10, whole genome shotgun sequence 128,168
JAHBXN010000011.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_11, whole genome shotgun sequence 99,636
JAHBXN010000012.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_12, whole genome shotgun sequence 80,897
JAHBXN010000013.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_13, whole genome shotgun sequence 77,707
JAHBXN010000014.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_14, whole genome shotgun sequence 76,149
JAHBXN010000015.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_15, whole genome shotgun sequence 73,830
JAHBXN010000016.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_16, whole genome shotgun sequence 72,010
JAHBXN010000017.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_17, whole genome shotgun sequence 14,636
JAHBXN010000018.1 MAG: Phycisphaerae bacterium isolate ACE_PLA21 PLA21_18, whole genome shotgun sequence 14,624

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory