fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAHBUP01 sp019638015 ACE_BAC36

Genome identifier: GCA_019638015.1

NCBI assembly name: ASM1963801v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae, JAHBUP01, JAHBUP01 sp019638015

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae

Scaffolds: 17

Genes: 3,520 Protein-coding: 3,463 RNAs: 51 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAHBUP010000001.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_1, whole genome shotgun sequence 4,015,158
JAHBUP010000002.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_2, whole genome shotgun sequence 42,449
JAHBUP010000003.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_3, whole genome shotgun sequence 9,440
JAHBUP010000004.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_4, whole genome shotgun sequence 6,517
JAHBUP010000005.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_5, whole genome shotgun sequence 5,538
JAHBUP010000006.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_6, whole genome shotgun sequence 5,195
JAHBUP010000007.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_7, whole genome shotgun sequence 3,278
JAHBUP010000008.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_8, whole genome shotgun sequence 3,252
JAHBUP010000009.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_9, whole genome shotgun sequence 3,138
JAHBUP010000010.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_10, whole genome shotgun sequence 3,071
JAHBUP010000011.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_11, whole genome shotgun sequence 2,910
JAHBUP010000012.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_12, whole genome shotgun sequence 2,530
JAHBUP010000013.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_13, whole genome shotgun sequence 1,943
JAHBUP010000014.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_14, whole genome shotgun sequence 1,558
JAHBUP010000015.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_15, whole genome shotgun sequence 1,525
JAHBUP010000016.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_16, whole genome shotgun sequence 1,377
JAHBUP010000017.1 MAG: Melioribacteraceae bacterium isolate ACE_BAC36 BAC36_17, whole genome shotgun sequence 1,376

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory