fast.genomicscompare 6,575 genera of bacteria & archaea

 

SSF53 sp019694655 SSF53

Genome identifier: GCA_019694655.1

NCBI assembly name: ASM1969465v1

GTDB taxonomy: Bacteria, Spirochaetota, Leptospirae, Leptospirales, Leptonemataceae, SSF53, SSF53 sp019694655

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Leptospirales

Scaffolds: 33

Genes: 3,657 Protein-coding: 3,602 RNAs: 45 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIBBN010000001.1 MAG: Leptospirales bacterium isolate SSF53 NODE_28_length_694910_cov_36.271342, whole genome shotgun sequence 694,910
JAIBBN010000002.1 MAG: Leptospirales bacterium isolate SSF53 NODE_46_length_574721_cov_34.121618, whole genome shotgun sequence 574,721
JAIBBN010000003.1 MAG: Leptospirales bacterium isolate SSF53 NODE_100_length_438307_cov_33.629075, whole genome shotgun sequence 438,307
JAIBBN010000004.1 MAG: Leptospirales bacterium isolate SSF53 NODE_153_length_375253_cov_34.749996, whole genome shotgun sequence 375,253
JAIBBN010000005.1 MAG: Leptospirales bacterium isolate SSF53 NODE_869_length_186034_cov_35.893963, whole genome shotgun sequence 186,034
JAIBBN010000006.1 MAG: Leptospirales bacterium isolate SSF53 NODE_1015_length_173359_cov_37.197619, whole genome shotgun sequence 173,359
JAIBBN010000007.1 MAG: Leptospirales bacterium isolate SSF53 NODE_1766_length_133958_cov_42.245407, whole genome shotgun sequence 133,958
JAIBBN010000008.1 MAG: Leptospirales bacterium isolate SSF53 NODE_1788_length_133368_cov_35.355296, whole genome shotgun sequence 133,368
JAIBBN010000009.1 MAG: Leptospirales bacterium isolate SSF53 NODE_2040_length_125378_cov_36.350911, whole genome shotgun sequence 125,378
JAIBBN010000010.1 MAG: Leptospirales bacterium isolate SSF53 NODE_2451_length_115165_cov_38.026635, whole genome shotgun sequence 115,165
JAIBBN010000011.1 MAG: Leptospirales bacterium isolate SSF53 NODE_3413_length_99071_cov_42.433680, whole genome shotgun sequence 99,071
JAIBBN010000012.1 MAG: Leptospirales bacterium isolate SSF53 NODE_3488_length_98006_cov_37.965314, whole genome shotgun sequence 98,006
JAIBBN010000013.1 MAG: Leptospirales bacterium isolate SSF53 NODE_4085_length_90439_cov_40.272500, whole genome shotgun sequence 90,439
JAIBBN010000014.1 MAG: Leptospirales bacterium isolate SSF53 NODE_4558_length_85061_cov_38.962901, whole genome shotgun sequence 85,061
JAIBBN010000015.1 MAG: Leptospirales bacterium isolate SSF53 NODE_6291_length_72589_cov_38.730673, whole genome shotgun sequence 72,589
JAIBBN010000016.1 MAG: Leptospirales bacterium isolate SSF53 NODE_8939_length_60280_cov_38.533423, whole genome shotgun sequence 60,280
JAIBBN010000017.1 MAG: Leptospirales bacterium isolate SSF53 NODE_10798_length_54180_cov_36.515050, whole genome shotgun sequence 54,180
JAIBBN010000018.1 MAG: Leptospirales bacterium isolate SSF53 NODE_11685_length_51802_cov_37.326444, whole genome shotgun sequence 51,802
JAIBBN010000019.1 MAG: Leptospirales bacterium isolate SSF53 NODE_12027_length_50930_cov_36.978702, whole genome shotgun sequence 50,930
JAIBBN010000020.1 MAG: Leptospirales bacterium isolate SSF53 NODE_13297_length_47999_cov_38.029913, whole genome shotgun sequence 47,999
JAIBBN010000021.1 MAG: Leptospirales bacterium isolate SSF53 NODE_13545_length_47483_cov_34.929133, whole genome shotgun sequence 47,483
JAIBBN010000022.1 MAG: Leptospirales bacterium isolate SSF53 NODE_14620_length_45315_cov_38.494711, whole genome shotgun sequence 45,315
JAIBBN010000023.1 MAG: Leptospirales bacterium isolate SSF53 NODE_18584_length_39311_cov_36.392048, whole genome shotgun sequence 39,311
JAIBBN010000024.1 MAG: Leptospirales bacterium isolate SSF53 NODE_28451_length_30182_cov_34.517418, whole genome shotgun sequence 30,182
JAIBBN010000025.1 MAG: Leptospirales bacterium isolate SSF53 NODE_35441_length_26172_cov_37.161989, whole genome shotgun sequence 26,172
JAIBBN010000026.1 MAG: Leptospirales bacterium isolate SSF53 NODE_88086_length_14129_cov_38.950007, whole genome shotgun sequence 14,129
JAIBBN010000027.1 MAG: Leptospirales bacterium isolate SSF53 NODE_133126_length_10554_cov_38.555097, whole genome shotgun sequence 10,554
JAIBBN010000028.1 MAG: Leptospirales bacterium isolate SSF53 NODE_150273_length_9661_cov_34.454479, whole genome shotgun sequence 9,661
JAIBBN010000029.1 MAG: Leptospirales bacterium isolate SSF53 NODE_208121_length_7631_cov_37.803571, whole genome shotgun sequence 7,631
JAIBBN010000030.1 MAG: Leptospirales bacterium isolate SSF53 NODE_222471_length_7264_cov_36.659100, whole genome shotgun sequence 7,264
JAIBBN010000031.1 MAG: Leptospirales bacterium isolate SSF53 NODE_226907_length_7161_cov_35.809639, whole genome shotgun sequence 7,161
JAIBBN010000032.1 MAG: Leptospirales bacterium isolate SSF53 NODE_234009_length_7006_cov_37.382323, whole genome shotgun sequence 7,006
JAIBBN010000033.1 MAG: Leptospirales bacterium isolate SSF53 NODE_464113_length_4305_cov_38.345141, whole genome shotgun sequence 4,305

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory