fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFDZO01 sp018266845 SSF34

Genome identifier: GCA_019694695.1

NCBI assembly name: ASM1969469v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, SJA-28, B-1AR, JAFDZO01, JAFDZO01 sp018266845

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 38

Genes: 3,394 Protein-coding: 3,332 RNAs: 52 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIBBL010000001.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_11_length_993800_cov_32.271062, whole genome shotgun sequence 993,800
JAIBBL010000002.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_71_length_490058_cov_25.733803, whole genome shotgun sequence 490,058
JAIBBL010000003.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_534_length_229681_cov_27.541428, whole genome shotgun sequence 229,681
JAIBBL010000004.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_786_length_193537_cov_28.735903, whole genome shotgun sequence 193,537
JAIBBL010000005.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_1113_length_165565_cov_31.177553, whole genome shotgun sequence 165,565
JAIBBL010000006.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_1401_length_149248_cov_31.829058, whole genome shotgun sequence 149,248
JAIBBL010000007.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_1595_length_140824_cov_25.976695, whole genome shotgun sequence 140,824
JAIBBL010000008.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_1864_length_130878_cov_27.328839, whole genome shotgun sequence 130,878
JAIBBL010000009.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_1925_length_129039_cov_29.142314, whole genome shotgun sequence 129,039
JAIBBL010000010.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_2515_length_113989_cov_28.583733, whole genome shotgun sequence 113,989
JAIBBL010000011.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_3033_length_104684_cov_27.639642, whole genome shotgun sequence 104,684
JAIBBL010000012.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_3207_length_101994_cov_26.492564, whole genome shotgun sequence 101,994
JAIBBL010000013.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_3425_length_98918_cov_29.757356, whole genome shotgun sequence 98,918
JAIBBL010000014.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_3457_length_98308_cov_25.539992, whole genome shotgun sequence 98,308
JAIBBL010000015.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_4736_length_83609_cov_29.865767, whole genome shotgun sequence 83,609
JAIBBL010000016.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_8254_length_62760_cov_25.930197, whole genome shotgun sequence 62,760
JAIBBL010000017.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_8594_length_61438_cov_26.461532, whole genome shotgun sequence 61,438
JAIBBL010000018.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_10218_length_56000_cov_26.485404, whole genome shotgun sequence 56,000
JAIBBL010000019.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_11503_length_52332_cov_28.403946, whole genome shotgun sequence 52,332
JAIBBL010000020.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_12667_length_49346_cov_27.545988, whole genome shotgun sequence 49,346
JAIBBL010000021.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_14633_length_45291_cov_39.300682, whole genome shotgun sequence 45,291
JAIBBL010000022.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_15328_length_44059_cov_25.383411, whole genome shotgun sequence 44,059
JAIBBL010000023.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_15559_length_43644_cov_26.128281, whole genome shotgun sequence 43,644
JAIBBL010000024.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_17622_length_40548_cov_27.057470, whole genome shotgun sequence 40,548
JAIBBL010000025.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_19806_length_37787_cov_27.518030, whole genome shotgun sequence 37,787
JAIBBL010000026.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_36549_length_25646_cov_26.659391, whole genome shotgun sequence 25,646
JAIBBL010000027.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_64441_length_17556_cov_31.545642, whole genome shotgun sequence 17,556
JAIBBL010000028.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_71045_length_16422_cov_20.380362, whole genome shotgun sequence 16,422
JAIBBL010000029.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_73741_length_16000_cov_25.692308, whole genome shotgun sequence 16,000
JAIBBL010000030.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_125800_length_10991_cov_30.018133, whole genome shotgun sequence 10,991
JAIBBL010000031.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_157504_length_9334_cov_30.791463, whole genome shotgun sequence 9,334
JAIBBL010000032.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_184346_length_8330_cov_27.802146, whole genome shotgun sequence 8,330
JAIBBL010000033.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_184889_length_8313_cov_46.876252, whole genome shotgun sequence 8,313
JAIBBL010000034.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_198276_length_7900_cov_30.454007, whole genome shotgun sequence 7,900
JAIBBL010000035.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_206055_length_7687_cov_26.116402, whole genome shotgun sequence 7,687
JAIBBL010000036.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_220525_length_7310_cov_24.694000, whole genome shotgun sequence 7,310
JAIBBL010000037.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_234341_length_6999_cov_22.724971, whole genome shotgun sequence 6,999
JAIBBL010000038.1 MAG: Ignavibacteria bacterium isolate SSF34 NODE_918987_length_2685_cov_37.876075, whole genome shotgun sequence 2,685

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory