fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAEZEZ01 sp019695035 SSF38

Genome identifier: GCA_019695035.1

NCBI assembly name: ASM1969503v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, Caulobacteraceae, JAEZEZ01, JAEZEZ01 sp019695035

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Caulobacterales, Caulobacteraceae

Scaffolds: 64

Genes: 2,990 Protein-coding: 2,917 RNAs: 49 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIBAU010000001.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_263_length_305570_cov_31.855439, whole genome shotgun sequence 305,570
JAIBAU010000002.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_721_length_202099_cov_32.160611, whole genome shotgun sequence 202,099
JAIBAU010000003.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_733_length_200100_cov_32.264596, whole genome shotgun sequence 200,100
JAIBAU010000004.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_1563_length_141987_cov_31.762907, whole genome shotgun sequence 141,987
JAIBAU010000005.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_1822_length_132323_cov_35.078845, whole genome shotgun sequence 132,323
JAIBAU010000006.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_1878_length_130329_cov_35.203607, whole genome shotgun sequence 130,329
JAIBAU010000007.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_2509_length_114077_cov_34.177341, whole genome shotgun sequence 114,077
JAIBAU010000008.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_2866_length_107165_cov_33.080467, whole genome shotgun sequence 107,165
JAIBAU010000009.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_3923_length_92285_cov_37.003451, whole genome shotgun sequence 92,285
JAIBAU010000010.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_4545_length_85179_cov_33.877428, whole genome shotgun sequence 85,179
JAIBAU010000011.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_4574_length_84950_cov_32.601405, whole genome shotgun sequence 84,950
JAIBAU010000012.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_5585_length_77281_cov_33.034917, whole genome shotgun sequence 77,281
JAIBAU010000013.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_5733_length_76149_cov_32.760004, whole genome shotgun sequence 76,149
JAIBAU010000014.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_5988_length_74423_cov_34.455193, whole genome shotgun sequence 74,423
JAIBAU010000015.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_6613_length_70820_cov_32.587441, whole genome shotgun sequence 70,772
JAIBAU010000016.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_7345_length_66795_cov_32.649322, whole genome shotgun sequence 66,795
JAIBAU010000017.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_9167_length_59408_cov_31.402237, whole genome shotgun sequence 59,408
JAIBAU010000018.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_9603_length_57965_cov_35.827051, whole genome shotgun sequence 57,965
JAIBAU010000019.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_10697_length_54518_cov_32.035631, whole genome shotgun sequence 54,518
JAIBAU010000020.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_14776_length_45041_cov_31.311952, whole genome shotgun sequence 45,041
JAIBAU010000021.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_16189_length_42624_cov_35.255830, whole genome shotgun sequence 42,624
JAIBAU010000022.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_16609_length_41997_cov_29.036231, whole genome shotgun sequence 41,997
JAIBAU010000023.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_20875_length_36609_cov_31.045968, whole genome shotgun sequence 36,609
JAIBAU010000024.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_23125_length_34392_cov_29.578170, whole genome shotgun sequence 34,392
JAIBAU010000025.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_23491_length_34044_cov_32.860070, whole genome shotgun sequence 34,044
JAIBAU010000026.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_29581_length_29420_cov_32.845902, whole genome shotgun sequence 29,420
JAIBAU010000027.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_33363_length_27220_cov_36.315690, whole genome shotgun sequence 27,220
JAIBAU010000028.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_33913_length_26937_cov_34.612122, whole genome shotgun sequence 26,937
JAIBAU010000029.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_34449_length_26658_cov_31.406129, whole genome shotgun sequence 26,658
JAIBAU010000030.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_37519_length_25216_cov_35.660847, whole genome shotgun sequence 25,216
JAIBAU010000031.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_39575_length_24338_cov_29.842923, whole genome shotgun sequence 24,338
JAIBAU010000032.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_46987_length_21758_cov_37.001526, whole genome shotgun sequence 21,758
JAIBAU010000033.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_47242_length_21681_cov_36.550756, whole genome shotgun sequence 21,681
JAIBAU010000034.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_48571_length_21290_cov_29.897132, whole genome shotgun sequence 21,290
JAIBAU010000035.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_52770_length_20167_cov_30.320010, whole genome shotgun sequence 20,118
JAIBAU010000036.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_61156_length_18210_cov_30.605154, whole genome shotgun sequence 18,210
JAIBAU010000037.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_64466_length_17553_cov_34.246930, whole genome shotgun sequence 17,553
JAIBAU010000038.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_64627_length_17524_cov_25.634132, whole genome shotgun sequence 17,524
JAIBAU010000039.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_66808_length_17129_cov_44.001059, whole genome shotgun sequence 17,129
JAIBAU010000040.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_71116_length_16411_cov_30.778986, whole genome shotgun sequence 16,411
JAIBAU010000041.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_78920_length_15249_cov_28.141979, whole genome shotgun sequence 15,249
JAIBAU010000042.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_78960_length_15244_cov_31.313554, whole genome shotgun sequence 15,244
JAIBAU010000043.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_79231_length_15208_cov_31.510245, whole genome shotgun sequence 15,208
JAIBAU010000044.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_81317_length_14922_cov_31.413788, whole genome shotgun sequence 14,922
JAIBAU010000045.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_81909_length_14849_cov_35.029276, whole genome shotgun sequence 14,849
JAIBAU010000046.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_85095_length_14465_cov_33.547636, whole genome shotgun sequence 14,465
JAIBAU010000047.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_97611_length_13127_cov_33.191769, whole genome shotgun sequence 13,127
JAIBAU010000048.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_108185_length_12214_cov_19.177712, whole genome shotgun sequence 12,214
JAIBAU010000049.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_113044_length_11853_cov_23.849139, whole genome shotgun sequence 11,853
JAIBAU010000050.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_151492_length_9605_cov_33.779595, whole genome shotgun sequence 9,605
JAIBAU010000051.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_184269_length_8333_cov_33.148794, whole genome shotgun sequence 8,333
JAIBAU010000052.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_205451_length_7703_cov_33.268347, whole genome shotgun sequence 7,703
JAIBAU010000053.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_214888_length_7450_cov_20.542264, whole genome shotgun sequence 7,450
JAIBAU010000054.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_220806_length_7303_cov_33.068562, whole genome shotgun sequence 7,303
JAIBAU010000055.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_270803_length_6302_cov_34.503158, whole genome shotgun sequence 6,302
JAIBAU010000056.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_345774_length_5297_cov_27.417988, whole genome shotgun sequence 5,297
JAIBAU010000057.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_459972_length_4332_cov_29.420452, whole genome shotgun sequence 4,332
JAIBAU010000058.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_522968_length_3960_cov_28.117923, whole genome shotgun sequence 3,960
JAIBAU010000059.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_562899_length_3763_cov_31.188394, whole genome shotgun sequence 3,763
JAIBAU010000060.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_597216_length_3610_cov_52.226816, whole genome shotgun sequence 3,610
JAIBAU010000061.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_611778_length_3550_cov_14.073620, whole genome shotgun sequence 3,550
JAIBAU010000062.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_671779_length_3327_cov_30.240625, whole genome shotgun sequence 3,327
JAIBAU010000063.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_754222_length_3072_cov_33.813243, whole genome shotgun sequence 3,072
JAIBAU010000064.1 MAG: Caulobacteraceae bacterium isolate SSF38 NODE_889166_length_2746_cov_25.057656, whole genome shotgun sequence 2,746

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory