fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAIBAG01 sp019695305 SSF43

Genome identifier: GCA_019695305.1

NCBI assembly name: ASM1969530v1

GTDB taxonomy: Bacteria, UBA10199, UBA10199, UBA10199, JAIBAG01, JAIBAG01, JAIBAG01 sp019695305

NCBI taxonomy: Bacteria

Scaffolds: 58

Genes: 2,607 Protein-coding: 2,549 RNAs: 52 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIBAG010000001.1 MAG: bacterium isolate SSF43 NODE_228_length_324107_cov_9.007519, whole genome shotgun sequence 324,107
JAIBAG010000002.1 MAG: bacterium isolate SSF43 NODE_865_length_186308_cov_7.900129, whole genome shotgun sequence 186,308
JAIBAG010000003.1 MAG: bacterium isolate SSF43 NODE_1318_length_153813_cov_7.808623, whole genome shotgun sequence 153,813
JAIBAG010000004.1 MAG: bacterium isolate SSF43 NODE_1610_length_140224_cov_8.073906, whole genome shotgun sequence 140,224
JAIBAG010000005.1 MAG: bacterium isolate SSF43 NODE_1782_length_133419_cov_7.839795, whole genome shotgun sequence 133,419
JAIBAG010000006.1 MAG: bacterium isolate SSF43 NODE_2188_length_121514_cov_7.515187, whole genome shotgun sequence 121,514
JAIBAG010000007.1 MAG: bacterium isolate SSF43 NODE_2227_length_120541_cov_7.992875, whole genome shotgun sequence 120,541
JAIBAG010000008.1 MAG: bacterium isolate SSF43 NODE_3587_length_96658_cov_8.503268, whole genome shotgun sequence 96,658
JAIBAG010000009.1 MAG: bacterium isolate SSF43 NODE_3991_length_91507_cov_8.772521, whole genome shotgun sequence 91,507
JAIBAG010000010.1 MAG: bacterium isolate SSF43 NODE_4075_length_90565_cov_8.322254, whole genome shotgun sequence 90,565
JAIBAG010000011.1 MAG: bacterium isolate SSF43 NODE_4689_length_83971_cov_8.501121, whole genome shotgun sequence 83,971
JAIBAG010000012.1 MAG: bacterium isolate SSF43 NODE_5778_length_75870_cov_8.569584, whole genome shotgun sequence 75,870
JAIBAG010000013.1 MAG: bacterium isolate SSF43 NODE_6201_length_73141_cov_7.854507, whole genome shotgun sequence 73,141
JAIBAG010000014.1 MAG: bacterium isolate SSF43 NODE_6670_length_70501_cov_8.174852, whole genome shotgun sequence 70,501
JAIBAG010000015.1 MAG: bacterium isolate SSF43 NODE_7171_length_67636_cov_7.779674, whole genome shotgun sequence 67,636
JAIBAG010000016.1 MAG: bacterium isolate SSF43 NODE_7519_length_65931_cov_8.290438, whole genome shotgun sequence 65,931
JAIBAG010000017.1 MAG: bacterium isolate SSF43 NODE_11624_length_51978_cov_8.843166, whole genome shotgun sequence 51,978
JAIBAG010000018.1 MAG: bacterium isolate SSF43 NODE_11767_length_51554_cov_7.353550, whole genome shotgun sequence 51,554
JAIBAG010000019.1 MAG: bacterium isolate SSF43 NODE_12356_length_50118_cov_7.925347, whole genome shotgun sequence 50,118
JAIBAG010000020.1 MAG: bacterium isolate SSF43 NODE_15918_length_43054_cov_8.224428, whole genome shotgun sequence 43,054
JAIBAG010000021.1 MAG: bacterium isolate SSF43 NODE_20367_length_37168_cov_7.694285, whole genome shotgun sequence 37,168
JAIBAG010000022.1 MAG: bacterium isolate SSF43 NODE_21377_length_36086_cov_7.474819, whole genome shotgun sequence 36,086
JAIBAG010000023.1 MAG: bacterium isolate SSF43 NODE_21496_length_35968_cov_8.561731, whole genome shotgun sequence 35,968
JAIBAG010000024.1 MAG: bacterium isolate SSF43 NODE_22680_length_34827_cov_7.656801, whole genome shotgun sequence 34,827
JAIBAG010000025.1 MAG: bacterium isolate SSF43 NODE_24385_length_33292_cov_8.421649, whole genome shotgun sequence 33,292
JAIBAG010000026.1 MAG: bacterium isolate SSF43 NODE_24445_length_33249_cov_8.240837, whole genome shotgun sequence 33,249
JAIBAG010000027.1 MAG: bacterium isolate SSF43 NODE_26913_length_31280_cov_8.214008, whole genome shotgun sequence 31,280
JAIBAG010000028.1 MAG: bacterium isolate SSF43 NODE_27590_length_30811_cov_9.286436, whole genome shotgun sequence 30,811
JAIBAG010000029.1 MAG: bacterium isolate SSF43 NODE_30014_length_29154_cov_8.855135, whole genome shotgun sequence 29,154
JAIBAG010000030.1 MAG: bacterium isolate SSF43 NODE_32638_length_27607_cov_7.723035, whole genome shotgun sequence 27,607
JAIBAG010000031.1 MAG: bacterium isolate SSF43 NODE_34960_length_26410_cov_7.738310, whole genome shotgun sequence 26,410
JAIBAG010000032.1 MAG: bacterium isolate SSF43 NODE_36908_length_25479_cov_7.361589, whole genome shotgun sequence 25,479
JAIBAG010000033.1 MAG: bacterium isolate SSF43 NODE_43189_length_22959_cov_7.748555, whole genome shotgun sequence 22,959
JAIBAG010000034.1 MAG: bacterium isolate SSF43 NODE_46719_length_21841_cov_7.645252, whole genome shotgun sequence 21,841
JAIBAG010000035.1 MAG: bacterium isolate SSF43 NODE_48251_length_21385_cov_8.914762, whole genome shotgun sequence 21,385
JAIBAG010000036.1 MAG: bacterium isolate SSF43 NODE_53694_length_19940_cov_8.873517, whole genome shotgun sequence 19,940
JAIBAG010000037.1 MAG: bacterium isolate SSF43 NODE_65806_length_17309_cov_7.908393, whole genome shotgun sequence 17,309
JAIBAG010000038.1 MAG: bacterium isolate SSF43 NODE_68078_length_16903_cov_7.740939, whole genome shotgun sequence 16,903
JAIBAG010000039.1 MAG: bacterium isolate SSF43 NODE_70661_length_16485_cov_6.682969, whole genome shotgun sequence 16,485
JAIBAG010000040.1 MAG: bacterium isolate SSF43 NODE_76667_length_15571_cov_8.183113, whole genome shotgun sequence 15,571
JAIBAG010000041.1 MAG: bacterium isolate SSF43 NODE_82857_length_14732_cov_7.646012, whole genome shotgun sequence 14,732
JAIBAG010000042.1 MAG: bacterium isolate SSF43 NODE_86241_length_14331_cov_7.197480, whole genome shotgun sequence 14,331
JAIBAG010000043.1 MAG: bacterium isolate SSF43 NODE_99076_length_12991_cov_6.754897, whole genome shotgun sequence 12,991
JAIBAG010000044.1 MAG: bacterium isolate SSF43 NODE_104987_length_12476_cov_9.375820, whole genome shotgun sequence 12,476
JAIBAG010000045.1 MAG: bacterium isolate SSF43 NODE_119225_length_11416_cov_8.525379, whole genome shotgun sequence 11,416
JAIBAG010000046.1 MAG: bacterium isolate SSF43 NODE_133192_length_10551_cov_7.388047, whole genome shotgun sequence 10,551
JAIBAG010000047.1 MAG: bacterium isolate SSF43 NODE_167332_length_8934_cov_5.937550, whole genome shotgun sequence 8,934
JAIBAG010000048.1 MAG: bacterium isolate SSF43 NODE_174790_length_8655_cov_7.281426, whole genome shotgun sequence 8,655
JAIBAG010000049.1 MAG: bacterium isolate SSF43 NODE_187211_length_8236_cov_7.681465, whole genome shotgun sequence 8,236
JAIBAG010000050.1 MAG: bacterium isolate SSF43 NODE_187997_length_8211_cov_8.389287, whole genome shotgun sequence 8,211
JAIBAG010000051.1 MAG: bacterium isolate SSF43 NODE_199955_length_7854_cov_8.243950, whole genome shotgun sequence 7,854
JAIBAG010000052.1 MAG: bacterium isolate SSF43 NODE_235444_length_6975_cov_7.547459, whole genome shotgun sequence 6,975
JAIBAG010000053.1 MAG: bacterium isolate SSF43 NODE_248585_length_6705_cov_4.790970, whole genome shotgun sequence 6,705
JAIBAG010000054.1 MAG: bacterium isolate SSF43 NODE_288235_length_6029_cov_8.747713, whole genome shotgun sequence 6,029
JAIBAG010000055.1 MAG: bacterium isolate SSF43 NODE_314778_length_5662_cov_7.992773, whole genome shotgun sequence 5,662
JAIBAG010000056.1 MAG: bacterium isolate SSF43 NODE_505643_length_4054_cov_7.648077, whole genome shotgun sequence 4,054
JAIBAG010000057.1 MAG: bacterium isolate SSF43 NODE_532441_length_3911_cov_7.391913, whole genome shotgun sequence 3,911
JAIBAG010000058.1 MAG: bacterium isolate SSF43 NODE_648875_length_3408_cov_6.921365, whole genome shotgun sequence 3,408

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory