fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAHJQQ01 sp019911805 MAG_65

Genome identifier: GCA_019911805.1

NCBI assembly name: ASM1991180v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, JAHJQQ01, JAHJQQ01, JAHJQQ01, JAHJQQ01 sp019911805

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria

Scaffolds: 128

Genes: 3,202 Protein-coding: 3,118 RNAs: 59 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIOJV010000001.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_1536, whole genome shotgun sequence 10,136
JAIOJV010000002.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_1758, whole genome shotgun sequence 1,310
JAIOJV010000003.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_6720, whole genome shotgun sequence 2,252
JAIOJV010000004.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_7027, whole genome shotgun sequence 62,210
JAIOJV010000005.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_8455, whole genome shotgun sequence 3,903
JAIOJV010000006.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_9495, whole genome shotgun sequence 55,126
JAIOJV010000007.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_16957, whole genome shotgun sequence 1,286
JAIOJV010000008.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_19834, whole genome shotgun sequence 4,625
JAIOJV010000009.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_21839, whole genome shotgun sequence 20,477
JAIOJV010000010.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_24530, whole genome shotgun sequence 8,472
JAIOJV010000011.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_26575, whole genome shotgun sequence 9,444
JAIOJV010000012.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_31617, whole genome shotgun sequence 3,051
JAIOJV010000013.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_36780, whole genome shotgun sequence 1,932
JAIOJV010000014.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_36848, whole genome shotgun sequence 16,496
JAIOJV010000015.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_41571, whole genome shotgun sequence 10,214
JAIOJV010000016.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_46772, whole genome shotgun sequence 83,286
JAIOJV010000017.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_48222, whole genome shotgun sequence 22,757
JAIOJV010000018.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_53241, whole genome shotgun sequence 14,420
JAIOJV010000019.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_53500, whole genome shotgun sequence 40,688
JAIOJV010000020.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_53832, whole genome shotgun sequence 11,809
JAIOJV010000021.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_53987, whole genome shotgun sequence 6,060
JAIOJV010000022.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_61983, whole genome shotgun sequence 2,037
JAIOJV010000023.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_64263, whole genome shotgun sequence 1,139
JAIOJV010000024.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_64474, whole genome shotgun sequence 12,966
JAIOJV010000025.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_68321, whole genome shotgun sequence 5,330
JAIOJV010000026.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_68604, whole genome shotgun sequence 6,818
JAIOJV010000027.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_69653, whole genome shotgun sequence 21,305
JAIOJV010000028.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_74469, whole genome shotgun sequence 41,793
JAIOJV010000029.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_78213, whole genome shotgun sequence 47,215
JAIOJV010000030.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_79938, whole genome shotgun sequence 1,382
JAIOJV010000031.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_82340, whole genome shotgun sequence 26,658
JAIOJV010000032.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_85864, whole genome shotgun sequence 32,570
JAIOJV010000033.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_87600, whole genome shotgun sequence 35,098
JAIOJV010000034.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_88011, whole genome shotgun sequence 91,905
JAIOJV010000035.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_88057, whole genome shotgun sequence 4,689
JAIOJV010000036.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_90200, whole genome shotgun sequence 37,522
JAIOJV010000037.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_92722, whole genome shotgun sequence 1,638
JAIOJV010000038.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_97989, whole genome shotgun sequence 22,159
JAIOJV010000039.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_101719, whole genome shotgun sequence 11,926
JAIOJV010000040.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_101769, whole genome shotgun sequence 17,881
JAIOJV010000041.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_103455, whole genome shotgun sequence 68,642
JAIOJV010000042.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_107540, whole genome shotgun sequence 59,344
JAIOJV010000043.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_108575, whole genome shotgun sequence 1,083
JAIOJV010000044.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_109115, whole genome shotgun sequence 2,377
JAIOJV010000045.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_112924, whole genome shotgun sequence 3,660
JAIOJV010000046.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_114852, whole genome shotgun sequence 1,596
JAIOJV010000047.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_117019, whole genome shotgun sequence 21,130
JAIOJV010000048.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_118066, whole genome shotgun sequence 117,196
JAIOJV010000049.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_118161, whole genome shotgun sequence 20,420
JAIOJV010000050.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_118483, whole genome shotgun sequence 1,031
JAIOJV010000051.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_121178, whole genome shotgun sequence 43,505
JAIOJV010000052.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_121501, whole genome shotgun sequence 236,273
JAIOJV010000053.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_123616, whole genome shotgun sequence 56,321
JAIOJV010000054.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_124703, whole genome shotgun sequence 26,738
JAIOJV010000055.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_130665, whole genome shotgun sequence 3,905
JAIOJV010000056.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_135177, whole genome shotgun sequence 4,415
JAIOJV010000057.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_143968, whole genome shotgun sequence 1,414
JAIOJV010000058.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_147507, whole genome shotgun sequence 1,205
JAIOJV010000059.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_156483, whole genome shotgun sequence 1,304
JAIOJV010000060.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_157614, whole genome shotgun sequence 56,464
JAIOJV010000061.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_161811, whole genome shotgun sequence 4,965
JAIOJV010000062.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_170794, whole genome shotgun sequence 1,886
JAIOJV010000063.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_171655, whole genome shotgun sequence 39,085
JAIOJV010000064.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_175062, whole genome shotgun sequence 16,884
JAIOJV010000065.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_177591, whole genome shotgun sequence 2,666
JAIOJV010000066.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_179913, whole genome shotgun sequence 15,185
JAIOJV010000067.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_180001, whole genome shotgun sequence 1,392
JAIOJV010000068.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_184661, whole genome shotgun sequence 2,560
JAIOJV010000069.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_187046, whole genome shotgun sequence 7,828
JAIOJV010000070.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_187907, whole genome shotgun sequence 5,792
JAIOJV010000071.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_193603, whole genome shotgun sequence 33,195
JAIOJV010000072.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_194630, whole genome shotgun sequence 33,363
JAIOJV010000073.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_201611, whole genome shotgun sequence 1,024
JAIOJV010000074.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_203097, whole genome shotgun sequence 208,417
JAIOJV010000075.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_203878, whole genome shotgun sequence 44,021
JAIOJV010000076.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_203947, whole genome shotgun sequence 39,395
JAIOJV010000077.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_206899, whole genome shotgun sequence 297,604
JAIOJV010000078.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_207286, whole genome shotgun sequence 42,817
JAIOJV010000079.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_211009, whole genome shotgun sequence 6,788
JAIOJV010000080.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_211089, whole genome shotgun sequence 1,221
JAIOJV010000081.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_211208, whole genome shotgun sequence 24,712
JAIOJV010000082.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_214729, whole genome shotgun sequence 8,434
JAIOJV010000083.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_215707, whole genome shotgun sequence 6,740
JAIOJV010000084.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_219601, whole genome shotgun sequence 3,595
JAIOJV010000085.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_220429, whole genome shotgun sequence 17,082
JAIOJV010000086.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_221623, whole genome shotgun sequence 26,734
JAIOJV010000087.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_226190, whole genome shotgun sequence 3,574
JAIOJV010000088.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_226546, whole genome shotgun sequence 95,841
JAIOJV010000089.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_230592, whole genome shotgun sequence 8,815
JAIOJV010000090.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_239383, whole genome shotgun sequence 9,590
JAIOJV010000091.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_240758, whole genome shotgun sequence 10,948
JAIOJV010000092.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_240844, whole genome shotgun sequence 18,487
JAIOJV010000093.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_241366, whole genome shotgun sequence 3,896
JAIOJV010000094.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_243172, whole genome shotgun sequence 21,640
JAIOJV010000095.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_243417, whole genome shotgun sequence 11,160
JAIOJV010000096.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_246141, whole genome shotgun sequence 11,608
JAIOJV010000097.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_248813, whole genome shotgun sequence 29,514
JAIOJV010000098.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_248926, whole genome shotgun sequence 94,294
JAIOJV010000099.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_258665, whole genome shotgun sequence 54,472
JAIOJV010000100.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_260187, whole genome shotgun sequence 39,692
JAIOJV010000101.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_263660, whole genome shotgun sequence 36,545
JAIOJV010000102.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_265578, whole genome shotgun sequence 2,462
JAIOJV010000103.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_270655, whole genome shotgun sequence 19,819
JAIOJV010000104.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_273307, whole genome shotgun sequence 1,316
JAIOJV010000105.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_275478, whole genome shotgun sequence 15,745
JAIOJV010000106.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_278394, whole genome shotgun sequence 25,409
JAIOJV010000107.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_280450, whole genome shotgun sequence 24,258
JAIOJV010000108.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_281172, whole genome shotgun sequence 24,536
JAIOJV010000109.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_283838, whole genome shotgun sequence 20,355
JAIOJV010000110.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_288251, whole genome shotgun sequence 8,957
JAIOJV010000111.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_288283, whole genome shotgun sequence 60,190
JAIOJV010000112.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_293319, whole genome shotgun sequence 14,940
JAIOJV010000113.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_293452, whole genome shotgun sequence 31,160
JAIOJV010000114.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_297990, whole genome shotgun sequence 7,237
JAIOJV010000115.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_304573, whole genome shotgun sequence 22,814
JAIOJV010000116.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_306235, whole genome shotgun sequence 61,623
JAIOJV010000117.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_307388, whole genome shotgun sequence 49,039
JAIOJV010000118.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_310211, whole genome shotgun sequence 52,910
JAIOJV010000119.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_311600, whole genome shotgun sequence 6,931
JAIOJV010000120.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_313355, whole genome shotgun sequence 13,196
JAIOJV010000121.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_314729, whole genome shotgun sequence 1,812
JAIOJV010000122.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_315126, whole genome shotgun sequence 3,466
JAIOJV010000123.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_320088, whole genome shotgun sequence 7,670
JAIOJV010000124.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_334829, whole genome shotgun sequence 7,017
JAIOJV010000125.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_337522, whole genome shotgun sequence 54,562
JAIOJV010000126.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_338331, whole genome shotgun sequence 1,918
JAIOJV010000127.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_338724, whole genome shotgun sequence 3,944
JAIOJV010000128.1 MAG: Gammaproteobacteria bacterium isolate MAG_65 contig_345161, whole genome shotgun sequence 45,919

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory