fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA5972 sp019911965 MAG_49

Genome identifier: GCA_019911965.1

NCBI assembly name: ASM1991196v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, UBA5972, UBA5972 sp019911965

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae

Scaffolds: 60

Genes: 3,575 Protein-coding: 3,497 RNAs: 49 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIOJF010000001.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_7640, whole genome shotgun sequence 19,462
JAIOJF010000002.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_12909, whole genome shotgun sequence 27,937
JAIOJF010000003.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_20100, whole genome shotgun sequence 22,700
JAIOJF010000004.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_22777, whole genome shotgun sequence 36,502
JAIOJF010000005.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_29063, whole genome shotgun sequence 43,383
JAIOJF010000006.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_29524, whole genome shotgun sequence 63,879
JAIOJF010000007.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_35519, whole genome shotgun sequence 36,692
JAIOJF010000008.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_39558, whole genome shotgun sequence 1,725
JAIOJF010000009.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_43195, whole genome shotgun sequence 109,743
JAIOJF010000010.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_45051, whole genome shotgun sequence 42,374
JAIOJF010000011.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_53541, whole genome shotgun sequence 92,851
JAIOJF010000012.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_58042, whole genome shotgun sequence 37,019
JAIOJF010000013.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_58819, whole genome shotgun sequence 59,751
JAIOJF010000014.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_59133, whole genome shotgun sequence 18,395
JAIOJF010000015.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_68761, whole genome shotgun sequence 78,779
JAIOJF010000016.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_69925, whole genome shotgun sequence 6,271
JAIOJF010000017.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_72439, whole genome shotgun sequence 66,487
JAIOJF010000018.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_76902, whole genome shotgun sequence 1,797
JAIOJF010000019.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_81203, whole genome shotgun sequence 3,309
JAIOJF010000020.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_83265, whole genome shotgun sequence 86,392
JAIOJF010000021.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_89762, whole genome shotgun sequence 30,899
JAIOJF010000022.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_97941, whole genome shotgun sequence 31,909
JAIOJF010000023.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_98218, whole genome shotgun sequence 10,133
JAIOJF010000024.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_102662, whole genome shotgun sequence 56,925
JAIOJF010000025.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_108290, whole genome shotgun sequence 309,934
JAIOJF010000026.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_110465, whole genome shotgun sequence 34,962
JAIOJF010000027.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_111057, whole genome shotgun sequence 108,365
JAIOJF010000028.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_116163, whole genome shotgun sequence 80,636
JAIOJF010000029.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_124605, whole genome shotgun sequence 183,450
JAIOJF010000030.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_134987, whole genome shotgun sequence 50,166
JAIOJF010000031.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_144142, whole genome shotgun sequence 162,833
JAIOJF010000032.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_146875, whole genome shotgun sequence 15,768
JAIOJF010000033.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_157037, whole genome shotgun sequence 28,440
JAIOJF010000034.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_162951, whole genome shotgun sequence 139,767
JAIOJF010000035.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_180449, whole genome shotgun sequence 31,325
JAIOJF010000036.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_190738, whole genome shotgun sequence 50,734
JAIOJF010000037.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_195741, whole genome shotgun sequence 17,620
JAIOJF010000038.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_197557, whole genome shotgun sequence 223,232
JAIOJF010000039.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_198935, whole genome shotgun sequence 79,136
JAIOJF010000040.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_203339, whole genome shotgun sequence 68,219
JAIOJF010000041.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_207538, whole genome shotgun sequence 41,808
JAIOJF010000042.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_217768, whole genome shotgun sequence 223,201
JAIOJF010000043.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_222787, whole genome shotgun sequence 87,275
JAIOJF010000044.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_225426, whole genome shotgun sequence 11,068
JAIOJF010000045.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_225510, whole genome shotgun sequence 76,949
JAIOJF010000046.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_232471, whole genome shotgun sequence 111,212
JAIOJF010000047.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_234900, whole genome shotgun sequence 6,372
JAIOJF010000048.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_241410, whole genome shotgun sequence 28,087
JAIOJF010000049.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_256177, whole genome shotgun sequence 101,534
JAIOJF010000050.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_257729, whole genome shotgun sequence 11,748
JAIOJF010000051.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_260601, whole genome shotgun sequence 7,343
JAIOJF010000052.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_272532, whole genome shotgun sequence 36,992
JAIOJF010000053.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_283208, whole genome shotgun sequence 95,313
JAIOJF010000054.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_287686, whole genome shotgun sequence 45,612
JAIOJF010000055.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_288033, whole genome shotgun sequence 3,769
JAIOJF010000056.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_290619, whole genome shotgun sequence 32,875
JAIOJF010000057.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_291958, whole genome shotgun sequence 55,835
JAIOJF010000058.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_301183, whole genome shotgun sequence 42,063
JAIOJF010000059.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_314649, whole genome shotgun sequence 75,983
JAIOJF010000060.1 MAG: Rhodobacteraceae bacterium isolate MAG_49 contig_322091, whole genome shotgun sequence 3,942

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory