fast.genomicscompare 6,575 genera of bacteria & archaea

 

SURF-10 sp020444545 MAG52

Genome identifier: GCA_020444545.1

NCBI assembly name: ASM2044454v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfarculia, Desulfarculales, Desulfarculaceae, SURF-10, SURF-10 sp020444545

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfarculia, Desulfarculales, Desulfarculaceae

Scaffolds: 11

Genes: 4,102 Protein-coding: 4,043 RNAs: 54 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAHLKT010000001.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_9_length_970559_cov_5302.597368, whole genome shotgun sequence 970,559
JAHLKT010000002.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_22_length_838847_cov_5138.931221, whole genome shotgun sequence 838,847
JAHLKT010000003.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_34_length_723169_cov_5268.460613, whole genome shotgun sequence 723,169
JAHLKT010000004.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_37_length_714335_cov_5230.571059, whole genome shotgun sequence 714,335
JAHLKT010000005.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_165_length_274783_cov_5280.625808, whole genome shotgun sequence 274,783
JAHLKT010000006.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_183_length_250672_cov_5083.846702, whole genome shotgun sequence 250,672
JAHLKT010000007.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_203_length_235731_cov_5213.118404, whole genome shotgun sequence 235,731
JAHLKT010000008.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_215_length_228252_cov_5203.662866, whole genome shotgun sequence 228,252
JAHLKT010000009.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_1251_length_63742_cov_5082.230471, whole genome shotgun sequence 63,742
JAHLKT010000010.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_1797_length_45657_cov_5258.022411, whole genome shotgun sequence 45,657
JAHLKT010000011.1 MAG: Desulfarculaceae bacterium isolate MAG52 NODE_2552_length_31909_cov_5366.730615, whole genome shotgun sequence 31,909

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory