fast.genomicscompare 6,575 genera of bacteria & archaea

 

Liberimonas magnetica DUR002

Genome identifier: GCA_020523885.1

NCBI assembly name: ASM2052388v1

GTDB taxonomy: Bacteria, Elusimicrobiota, Endomicrobiia, Endomicrobiales, JAFGIL01, Liberimonas, Liberimonas magnetica

NCBI taxonomy: Bacteria, Elusimicrobiota, Endomicrobiia, Endomicrobiales, Candidatus Liberimonas, Candidatus Liberimonas magnetica

Scaffolds: 29

Genes: 2,714 Protein-coding: 2,643 RNAs: 50 pseudogenes: 21

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAJAPY010000001.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_1_length_432506, whole genome shotgun sequence 432,506
JAJAPY010000002.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_2_length_368698, whole genome shotgun sequence 368,698
JAJAPY010000003.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_3_length_294701, whole genome shotgun sequence 294,701
JAJAPY010000004.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_4_length_268762, whole genome shotgun sequence 268,762
JAJAPY010000005.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_5_length_219237, whole genome shotgun sequence 219,237
JAJAPY010000006.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_6_length_185704, whole genome shotgun sequence 185,704
JAJAPY010000007.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_7_length_181864, whole genome shotgun sequence 181,864
JAJAPY010000008.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_8_length_114280, whole genome shotgun sequence 114,280
JAJAPY010000009.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_9_length_110585, whole genome shotgun sequence 110,585
JAJAPY010000010.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_10_length_102124, whole genome shotgun sequence 102,124
JAJAPY010000011.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_11_length_98035, whole genome shotgun sequence 98,035
JAJAPY010000012.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_12_length_92144, whole genome shotgun sequence 92,144
JAJAPY010000013.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_13_length_84765, whole genome shotgun sequence 84,765
JAJAPY010000014.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_14_length_79527, whole genome shotgun sequence 79,527
JAJAPY010000015.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_15_length_77725, whole genome shotgun sequence 77,725
JAJAPY010000016.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_16_length_76900, whole genome shotgun sequence 76,900
JAJAPY010000017.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_17_length_67723, whole genome shotgun sequence 67,723
JAJAPY010000018.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_18_length_64936, whole genome shotgun sequence 64,936
JAJAPY010000019.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_19_length_64744, whole genome shotgun sequence 64,744
JAJAPY010000020.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_20_length_64338, whole genome shotgun sequence 64,338
JAJAPY010000021.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_21_length_59453, whole genome shotgun sequence 59,453
JAJAPY010000022.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_22_length_54515, whole genome shotgun sequence 54,515
JAJAPY010000023.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_23_length_53411, whole genome shotgun sequence 53,411
JAJAPY010000024.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_24_length_48867, whole genome shotgun sequence 48,867
JAJAPY010000025.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_25_length_37912, whole genome shotgun sequence 37,912
JAJAPY010000026.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_26_length_27055, whole genome shotgun sequence 27,055
JAJAPY010000027.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_27_length_23057, whole genome shotgun sequence 23,057
JAJAPY010000028.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_28_length_21161, whole genome shotgun sequence 21,161
JAJAPY010000029.1 MAG: Candidatus Liberimonas magnetica isolate DUR002 NODE_29_length_19394, whole genome shotgun sequence 19,394

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory