fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudoscilispira sp018369915 DFI.7.65

Genome identifier: GCA_020555865.1

NCBI assembly name: ASM2055586v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Oscillospiraceae, Pseudoscilispira, Pseudoscilispira sp018369915

NCBI taxonomy: Bacteria

Scaffolds: 27

Genes: 2,274 Protein-coding: 2,187 RNAs: 58 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAJCJJ010000001.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_1, whole genome shotgun sequence 681,925
JAJCJJ010000002.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_2, whole genome shotgun sequence 383,270
JAJCJJ010000003.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_3, whole genome shotgun sequence 293,002
JAJCJJ010000004.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_4, whole genome shotgun sequence 238,304
JAJCJJ010000005.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_5, whole genome shotgun sequence 236,353
JAJCJJ010000006.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_6, whole genome shotgun sequence 169,346
JAJCJJ010000007.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_7, whole genome shotgun sequence 158,448
JAJCJJ010000008.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_8, whole genome shotgun sequence 20,549
JAJCJJ010000009.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_9, whole genome shotgun sequence 8,251
JAJCJJ010000010.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_10, whole genome shotgun sequence 5,797
JAJCJJ010000011.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_11, whole genome shotgun sequence 544
JAJCJJ010000012.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_12, whole genome shotgun sequence 466
JAJCJJ010000013.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_13, whole genome shotgun sequence 418
JAJCJJ010000014.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_14, whole genome shotgun sequence 418
JAJCJJ010000015.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_15, whole genome shotgun sequence 412
JAJCJJ010000016.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_16, whole genome shotgun sequence 411
JAJCJJ010000017.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_17, whole genome shotgun sequence 395
JAJCJJ010000018.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_18, whole genome shotgun sequence 391
JAJCJJ010000019.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_19, whole genome shotgun sequence 390
JAJCJJ010000020.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_20, whole genome shotgun sequence 388
JAJCJJ010000021.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_21, whole genome shotgun sequence 385
JAJCJJ010000022.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_22, whole genome shotgun sequence 369
JAJCJJ010000023.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_23, whole genome shotgun sequence 311
JAJCJJ010000024.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_24, whole genome shotgun sequence 258
JAJCJJ010000025.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_25, whole genome shotgun sequence 228
JAJCJJ010000026.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_26, whole genome shotgun sequence 210
JAJCJJ010000027.1 Bacterium 210917-DFI.7.65 strain DFI.7.65 OHJDKNLD_27, whole genome shotgun sequence 207

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory