fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACKFA01 sp020632715 HK-STAS-MYXO-48

Genome identifier: GCA_020632715.1

NCBI assembly name: ASM2063271v1

GTDB taxonomy: Bacteria, Myxococcota, UBA9042, PHBI01, PHBI01, JACKFA01, JACKFA01 sp020632715

NCBI taxonomy: Bacteria, Deltaproteobacteria

Scaffolds: 18

Genes: 6,807 Protein-coding: 6,637 RNAs: 56 pseudogenes: 114

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKFA010000001.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_1, whole genome shotgun sequence 1,871,580
JACKFA010000002.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_2, whole genome shotgun sequence 1,349,711
JACKFA010000003.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_3, whole genome shotgun sequence 1,237,663
JACKFA010000004.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_4, whole genome shotgun sequence 1,043,817
JACKFA010000005.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_5, whole genome shotgun sequence 710,951
JACKFA010000006.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_6, whole genome shotgun sequence 662,492
JACKFA010000007.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_7, whole genome shotgun sequence 481,525
JACKFA010000008.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_8, whole genome shotgun sequence 474,255
JACKFA010000009.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_9, whole genome shotgun sequence 446,977
JACKFA010000010.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_10, whole genome shotgun sequence 396,080
JACKFA010000011.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_11, whole genome shotgun sequence 366,811
JACKFA010000012.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_12, whole genome shotgun sequence 169,686
JACKFA010000013.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_13, whole genome shotgun sequence 149,456
JACKFA010000014.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_14, whole genome shotgun sequence 109,885
JACKFA010000015.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_15, whole genome shotgun sequence 42,195
JACKFA010000016.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_16, whole genome shotgun sequence 1,704
JACKFA010000017.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_17, whole genome shotgun sequence 34,774
JACKFA010000018.1 MAG: Deltaproteobacteria bacterium isolate HK-STAS-MYXO-48 HK-STAS-MYXO-48_18, whole genome shotgun sequence 10,483

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory