fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACKDX01 sp020633325 HK-STAS-MYXO-18

Genome identifier: GCA_020633325.1

NCBI assembly name: ASM2063332v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, GCA-016699535, JACKDX01, JACKDX01 sp020633325

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales

Scaffolds: 4

Genes: 2,450 Protein-coding: 2,388 RNAs: 52 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKDX010000001.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-18 HK-STAS-MYXO-18_1, whole genome shotgun sequence 1,856,510
JACKDX010000002.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-18 HK-STAS-MYXO-18_2, whole genome shotgun sequence 731,202
JACKDX010000003.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-18 HK-STAS-MYXO-18_3, whole genome shotgun sequence 86,582
JACKDX010000004.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-18 HK-STAS-MYXO-18_4, whole genome shotgun sequence 69,497

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory