fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACKDP01 sp020633435 HK-STAS-MYXO-10

Genome identifier: GCA_020633435.1

NCBI assembly name: ASM2063343v1

GTDB taxonomy: Bacteria, Myxococcota, Bradymonadia, UBA7976, UBA1532, JACKDP01, JACKDP01 sp020633435

NCBI taxonomy: Bacteria, Myxococcota, Myxococcia, Myxococcales

Scaffolds: 16

Genes: 6,254 Protein-coding: 6,040 RNAs: 54 pseudogenes: 160

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKDP010000001.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_1, whole genome shotgun sequence 1,738,311
JACKDP010000002.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_2, whole genome shotgun sequence 908,650
JACKDP010000003.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_3, whole genome shotgun sequence 901,160
JACKDP010000004.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_4, whole genome shotgun sequence 797,066
JACKDP010000005.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_5, whole genome shotgun sequence 690,085
JACKDP010000006.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_6, whole genome shotgun sequence 567,988
JACKDP010000007.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_7, whole genome shotgun sequence 526,682
JACKDP010000008.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_8, whole genome shotgun sequence 445,617
JACKDP010000009.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_9, whole genome shotgun sequence 426,094
JACKDP010000010.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_10, whole genome shotgun sequence 326,306
JACKDP010000011.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_11, whole genome shotgun sequence 246,593
JACKDP010000012.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_12, whole genome shotgun sequence 145,650
JACKDP010000013.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_13, whole genome shotgun sequence 97,287
JACKDP010000014.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_14, whole genome shotgun sequence 61,119
JACKDP010000015.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_15, whole genome shotgun sequence 57,561
JACKDP010000016.1 MAG: Myxococcales bacterium isolate HK-STAS-MYXO-10 HK-STAS-MYXO-10_16, whole genome shotgun sequence 42,345

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory