fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACKCN01 sp020634015 HK-STAS-DELO-1

Genome identifier: GCA_020634015.1

NCBI assembly name: ASM2063401v1

GTDB taxonomy: Bacteria, Delongbacteria, UBA4055, CAIWAD01, CAIWAD01, JACKCN01, JACKCN01 sp020634015

NCBI taxonomy: Bacteria, Candidatus Delongbacteria

Scaffolds: 17

Genes: 3,115 Protein-coding: 3,045 RNAs: 56 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKCN010000001.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_1, whole genome shotgun sequence 1,047,445
JACKCN010000002.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_2, whole genome shotgun sequence 667,176
JACKCN010000003.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_3, whole genome shotgun sequence 486,764
JACKCN010000004.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_4, whole genome shotgun sequence 397,620
JACKCN010000005.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_5, whole genome shotgun sequence 352,152
JACKCN010000006.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_6, whole genome shotgun sequence 303,732
JACKCN010000007.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_7, whole genome shotgun sequence 190,150
JACKCN010000008.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_8, whole genome shotgun sequence 183,887
JACKCN010000009.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_9, whole genome shotgun sequence 63,793
JACKCN010000010.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_10, whole genome shotgun sequence 53,569
JACKCN010000011.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_11, whole genome shotgun sequence 29,621
JACKCN010000012.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_12, whole genome shotgun sequence 26,461
JACKCN010000013.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_13, whole genome shotgun sequence 21,477
JACKCN010000014.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_14, whole genome shotgun sequence 20,954
JACKCN010000015.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_15, whole genome shotgun sequence 16,947
JACKCN010000016.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_16, whole genome shotgun sequence 12,665
JACKCN010000017.1 MAG: Candidatus Delongbacteria bacterium isolate HK-STAS-DELO-1 HK-STAS-DELO-1_17, whole genome shotgun sequence 10,799

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory