fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGWAZ01 sp020635205 HK-STAS-BACT-82

Genome identifier: GCA_020635205.1

NCBI assembly name: ASM2063520v1

GTDB taxonomy: Bacteria, Bacteroidota, Kapaibacteriia, OLB7, OLB7, JAGWAZ01, JAGWAZ01 sp020635205

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria

Scaffolds: 14

Genes: 3,662 Protein-coding: 3,595 RNAs: 56 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKAE010000001.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_1, whole genome shotgun sequence 1,282,117
JACKAE010000002.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_2, whole genome shotgun sequence 1,122,865
JACKAE010000003.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_3, whole genome shotgun sequence 1,066,595
JACKAE010000004.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_4, whole genome shotgun sequence 659,791
JACKAE010000005.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_5, whole genome shotgun sequence 469,983
JACKAE010000006.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_6, whole genome shotgun sequence 62,312
JACKAE010000007.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_7, whole genome shotgun sequence 62,096
JACKAE010000008.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_8, whole genome shotgun sequence 4,198
JACKAE010000009.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_9, whole genome shotgun sequence 1,312
JACKAE010000010.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_10, whole genome shotgun sequence 5,109
JACKAE010000011.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_11, whole genome shotgun sequence 1,165
JACKAE010000012.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_12, whole genome shotgun sequence 2,820
JACKAE010000013.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_13, whole genome shotgun sequence 2,036
JACKAE010000014.1 MAG: Ignavibacteria bacterium isolate HK-STAS-BACT-82 HK-STAS-BACT-82_14, whole genome shotgun sequence 1,280

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory