fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAEYVS01 sp020635255 HK-STAS-BACT-80

Genome identifier: GCA_020635255.1

NCBI assembly name: ASM2063525v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, SJA-28, B-1AR, JAEYVS01, JAEYVS01 sp020635255

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria, Ignavibacteriales

Scaffolds: 4

Genes: 2,797 Protein-coding: 2,747 RNAs: 47 pseudogenes: 3

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKAC010000001.1 MAG: Ignavibacteriales bacterium isolate HK-STAS-BACT-80 HK-STAS-BACT-80_1, whole genome shotgun sequence 1,739,672
JACKAC010000002.1 MAG: Ignavibacteriales bacterium isolate HK-STAS-BACT-80 HK-STAS-BACT-80_2, whole genome shotgun sequence 1,016,703
JACKAC010000003.1 MAG: Ignavibacteriales bacterium isolate HK-STAS-BACT-80 HK-STAS-BACT-80_3, whole genome shotgun sequence 198,268
JACKAC010000004.1 MAG: Ignavibacteriales bacterium isolate HK-STAS-BACT-80 HK-STAS-BACT-80_4, whole genome shotgun sequence 114,198

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory