fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACJZS01 sp020635515 HK-STAS-BACT-70

Genome identifier: GCA_020635515.1

NCBI assembly name: ASM2063551v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Weeksellaceae, JACJZS01, JACJZS01 sp020635515

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales

Scaffolds: 5

Genes: 1,972 Protein-coding: 1,909 RNAs: 44 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACJZS010000001.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-70 HK-STAS-BACT-70_1, whole genome shotgun sequence 1,664
JACJZS010000002.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-70 HK-STAS-BACT-70_2, whole genome shotgun sequence 1,553,741
JACJZS010000003.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-70 HK-STAS-BACT-70_3, whole genome shotgun sequence 286,727
JACJZS010000004.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-70 HK-STAS-BACT-70_4, whole genome shotgun sequence 138,347
JACJZS010000005.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-70 HK-STAS-BACT-70_5, whole genome shotgun sequence 134,145

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory