fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACJYZ01 sp020635855 HK-STAS-BACT-51

Genome identifier: GCA_020635855.1

NCBI assembly name: ASM2063585v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, JACJYZ01, JACJYZ01, JACJYZ01 sp020635855

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales

Scaffolds: 6

Genes: 3,149 Protein-coding: 3,079 RNAs: 46 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACJYZ010000001.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-51 HK-STAS-BACT-51_1, whole genome shotgun sequence 1,095
JACJYZ010000002.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-51 HK-STAS-BACT-51_2, whole genome shotgun sequence 2,000,801
JACJYZ010000003.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-51 HK-STAS-BACT-51_3, whole genome shotgun sequence 891,551
JACJYZ010000004.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-51 HK-STAS-BACT-51_4, whole genome shotgun sequence 867,275
JACJYZ010000005.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-51 HK-STAS-BACT-51_5, whole genome shotgun sequence 2,474
JACJYZ010000006.1 MAG: Flavobacteriales bacterium isolate HK-STAS-BACT-51 HK-STAS-BACT-51_6, whole genome shotgun sequence 1,081

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory