fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACKJA01 sp020638175 HK-STAS-PROT-27

Genome identifier: GCA_020638175.1

NCBI assembly name: ASM2063817v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Micavibrionales, Micavibrionaceae, JACKJA01, JACKJA01 sp020638175

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales

Scaffolds: 2

Genes: 2,105 Protein-coding: 2,045 RNAs: 49 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKJA010000001.1 MAG: Rhodospirillales bacterium isolate HK-STAS-PROT-27 HK-STAS-PROT-27_1, whole genome shotgun sequence 8,583
JACKJA010000002.1 MAG: Rhodospirillales bacterium isolate HK-STAS-PROT-27 HK-STAS-PROT-27_2, whole genome shotgun sequence 2,092,715

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory