fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAIORK01 sp021108215 SMBSF16

Genome identifier: GCA_021108215.1

NCBI assembly name: ASM2110821v1

GTDB taxonomy: Bacteria, JAAXVQ01, JAAXVQ01, JAAXVQ01, JAAXVQ01, JAIORK01, JAIORK01 sp021108215

NCBI taxonomy: Bacteria

Scaffolds: 67

Genes: 2,772 Protein-coding: 2,698 RNAs: 52 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIORK010000001.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000011, whole genome shotgun sequence 137,617
JAIORK010000002.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000028, whole genome shotgun sequence 85,315
JAIORK010000003.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000005418, whole genome shotgun sequence 1,521
JAIORK010000004.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000043, whole genome shotgun sequence 64,530
JAIORK010000005.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000086, whole genome shotgun sequence 36,689
JAIORK010000006.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000017, whole genome shotgun sequence 120,394
JAIORK010000007.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001313, whole genome shotgun sequence 4,832
JAIORK010000008.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000015, whole genome shotgun sequence 126,386
JAIORK010000009.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000089, whole genome shotgun sequence 35,974
JAIORK010000010.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000003738, whole genome shotgun sequence 2,172
JAIORK010000011.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000044, whole genome shotgun sequence 63,678
JAIORK010000012.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000005, whole genome shotgun sequence 179,823
JAIORK010000013.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001601, whole genome shotgun sequence 4,206
JAIORK010000014.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000032, whole genome shotgun sequence 73,414
JAIORK010000015.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000005252, whole genome shotgun sequence 1,565
JAIORK010000016.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000051, whole genome shotgun sequence 57,649
JAIORK010000017.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000006617, whole genome shotgun sequence 1,217
JAIORK010000018.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000010, whole genome shotgun sequence 142,462
JAIORK010000019.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000144, whole genome shotgun sequence 26,532
JAIORK010000020.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001623, whole genome shotgun sequence 4,172
JAIORK010000021.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000127, whole genome shotgun sequence 28,000
JAIORK010000022.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000072, whole genome shotgun sequence 42,832
JAIORK010000023.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000090, whole genome shotgun sequence 35,719
JAIORK010000024.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000007282, whole genome shotgun sequence 1,082
JAIORK010000025.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000138, whole genome shotgun sequence 27,337
JAIORK010000026.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000006, whole genome shotgun sequence 167,396
JAIORK010000027.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001779, whole genome shotgun sequence 3,901
JAIORK010000028.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000012, whole genome shotgun sequence 137,097
JAIORK010000029.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000013, whole genome shotgun sequence 130,947
JAIORK010000030.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000005784, whole genome shotgun sequence 1,418
JAIORK010000031.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000064, whole genome shotgun sequence 46,281
JAIORK010000032.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000002, whole genome shotgun sequence 221,731
JAIORK010000033.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000093, whole genome shotgun sequence 35,414
JAIORK010000034.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000125, whole genome shotgun sequence 28,230
JAIORK010000035.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000005029, whole genome shotgun sequence 1,632
JAIORK010000036.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000003, whole genome shotgun sequence 189,170
JAIORK010000037.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000014, whole genome shotgun sequence 126,777
JAIORK010000038.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000126, whole genome shotgun sequence 28,109
JAIORK010000039.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000027, whole genome shotgun sequence 86,111
JAIORK010000040.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000139, whole genome shotgun sequence 27,269
JAIORK010000041.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000007025, whole genome shotgun sequence 1,128
JAIORK010000042.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000124, whole genome shotgun sequence 28,417
JAIORK010000043.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000207, whole genome shotgun sequence 19,854
JAIORK010000044.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000004189, whole genome shotgun sequence 1,954
JAIORK010000045.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000007, whole genome shotgun sequence 161,448
JAIORK010000046.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000861, whole genome shotgun sequence 6,541
JAIORK010000047.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000087, whole genome shotgun sequence 36,397
JAIORK010000048.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000047, whole genome shotgun sequence 61,959
JAIORK010000049.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000001, whole genome shotgun sequence 270,488
JAIORK010000050.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000016, whole genome shotgun sequence 125,993
JAIORK010000051.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000004422, whole genome shotgun sequence 1,840
JAIORK010000052.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000106, whole genome shotgun sequence 31,982
JAIORK010000053.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000506, whole genome shotgun sequence 9,310
JAIORK010000054.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000194, whole genome shotgun sequence 20,897
JAIORK010000055.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000008, whole genome shotgun sequence 147,634
JAIORK010000056.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000005845, whole genome shotgun sequence 1,402
JAIORK010000057.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000006389, whole genome shotgun sequence 1,264
JAIORK010000058.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000463, whole genome shotgun sequence 9,977
JAIORK010000059.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000224, whole genome shotgun sequence 18,343
JAIORK010000060.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001391, whole genome shotgun sequence 4,644
JAIORK010000061.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000005258, whole genome shotgun sequence 1,564
JAIORK010000062.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001974, whole genome shotgun sequence 3,604
JAIORK010000063.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001176, whole genome shotgun sequence 5,271
JAIORK010000064.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000132, whole genome shotgun sequence 27,653
JAIORK010000065.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000001524, whole genome shotgun sequence 4,365
JAIORK010000066.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000002539, whole genome shotgun sequence 2,987
JAIORK010000067.1 MAG: bacterium isolate SMBSF16 20073_Bin_2_contigs_1_c_000000000250, whole genome shotgun sequence 16,736

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory