fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGHAM01 sp021161465 AUK230

Genome identifier: GCA_021161465.1

NCBI assembly name: ASM2116146v1

GTDB taxonomy: Archaea, B1Sed10-29, B1Sed10-29, WALL01, JAGHAM01, JAGHAM01, JAGHAM01 sp021161465

NCBI taxonomy: Archaea, Candidatus Diapherotrites

Scaffolds: 40

Genes: 1,118 Protein-coding: 1,074 RNAs: 39 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGHAM010000001.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000017, whole genome shotgun sequence 12,319
JAGHAM010000002.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000011, whole genome shotgun sequence 13,329
JAGHAM010000003.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000029, whole genome shotgun sequence 69,676
JAGHAM010000004.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000040, whole genome shotgun sequence 77,061
JAGHAM010000005.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000020, whole genome shotgun sequence 25,362
JAGHAM010000006.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000014, whole genome shotgun sequence 22,469
JAGHAM010000007.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000018, whole genome shotgun sequence 36,798
JAGHAM010000008.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000002, whole genome shotgun sequence 24,815
JAGHAM010000009.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000037, whole genome shotgun sequence 28,362
JAGHAM010000010.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000015, whole genome shotgun sequence 17,462
JAGHAM010000011.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000013, whole genome shotgun sequence 9,085
JAGHAM010000012.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000004, whole genome shotgun sequence 64,578
JAGHAM010000013.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000028, whole genome shotgun sequence 10,201
JAGHAM010000014.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000010, whole genome shotgun sequence 7,005
JAGHAM010000015.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000036, whole genome shotgun sequence 11,964
JAGHAM010000016.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000027, whole genome shotgun sequence 16,741
JAGHAM010000017.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000005, whole genome shotgun sequence 20,947
JAGHAM010000018.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000022, whole genome shotgun sequence 9,204
JAGHAM010000019.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000033, whole genome shotgun sequence 39,014
JAGHAM010000020.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000038, whole genome shotgun sequence 5,155
JAGHAM010000021.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000003, whole genome shotgun sequence 18,198
JAGHAM010000022.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000023, whole genome shotgun sequence 8,771
JAGHAM010000023.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000035, whole genome shotgun sequence 76,470
JAGHAM010000024.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000007, whole genome shotgun sequence 27,252
JAGHAM010000025.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000031, whole genome shotgun sequence 4,796
JAGHAM010000026.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000016, whole genome shotgun sequence 38,954
JAGHAM010000027.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000012, whole genome shotgun sequence 10,676
JAGHAM010000028.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000006, whole genome shotgun sequence 17,618
JAGHAM010000029.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000032, whole genome shotgun sequence 12,776
JAGHAM010000030.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000026, whole genome shotgun sequence 4,239
JAGHAM010000031.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000008, whole genome shotgun sequence 8,857
JAGHAM010000032.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000024, whole genome shotgun sequence 15,488
JAGHAM010000033.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000025, whole genome shotgun sequence 17,519
JAGHAM010000034.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000034, whole genome shotgun sequence 6,844
JAGHAM010000035.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000001, whole genome shotgun sequence 17,633
JAGHAM010000036.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000030, whole genome shotgun sequence 89,653
JAGHAM010000037.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000009, whole genome shotgun sequence 10,197
JAGHAM010000038.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000039, whole genome shotgun sequence 19,003
JAGHAM010000039.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000019, whole genome shotgun sequence 30,835
JAGHAM010000040.1 MAG: Candidatus Diapherotrites archaeon isolate AUK230 PB_MBMC_184_c_000000000021, whole genome shotgun sequence 18,960

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory