fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGGYF01 sp021162685 AUK171

Genome identifier: GCA_021162685.1

NCBI assembly name: ASM2116268v1

GTDB taxonomy: Archaea, B1Sed10-29, B1Sed10-29, WALL01, WALL01, JAGGYF01, JAGGYF01 sp021162685

NCBI taxonomy: Archaea, Candidatus Diapherotrites

Scaffolds: 45

Genes: 1,318 Protein-coding: 1,262 RNAs: 50 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAGGYF010000001.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000034, whole genome shotgun sequence 18,562
JAGGYF010000002.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000029, whole genome shotgun sequence 54,401
JAGGYF010000003.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000028, whole genome shotgun sequence 37,098
JAGGYF010000004.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000005, whole genome shotgun sequence 5,195
JAGGYF010000005.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000044, whole genome shotgun sequence 7,325
JAGGYF010000006.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000004, whole genome shotgun sequence 5,683
JAGGYF010000007.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000016, whole genome shotgun sequence 29,521
JAGGYF010000008.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000025, whole genome shotgun sequence 11,601
JAGGYF010000009.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000013, whole genome shotgun sequence 3,957
JAGGYF010000010.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000020, whole genome shotgun sequence 15,106
JAGGYF010000011.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000032, whole genome shotgun sequence 12,759
JAGGYF010000012.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000041, whole genome shotgun sequence 29,027
JAGGYF010000013.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000039, whole genome shotgun sequence 8,316
JAGGYF010000014.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000012, whole genome shotgun sequence 11,135
JAGGYF010000015.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000035, whole genome shotgun sequence 49,951
JAGGYF010000016.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000023, whole genome shotgun sequence 5,431
JAGGYF010000017.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000046, whole genome shotgun sequence 17,980
JAGGYF010000018.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000010, whole genome shotgun sequence 4,685
JAGGYF010000019.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000049, whole genome shotgun sequence 4,397
JAGGYF010000020.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000006, whole genome shotgun sequence 7,699
JAGGYF010000021.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000030, whole genome shotgun sequence 78,166
JAGGYF010000022.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000048, whole genome shotgun sequence 45,079
JAGGYF010000023.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000033, whole genome shotgun sequence 3,702
JAGGYF010000024.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000038, whole genome shotgun sequence 21,164
JAGGYF010000025.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000026, whole genome shotgun sequence 7,676
JAGGYF010000026.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000042, whole genome shotgun sequence 87,906
JAGGYF010000027.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000040, whole genome shotgun sequence 56,799
JAGGYF010000028.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000017, whole genome shotgun sequence 73,087
JAGGYF010000029.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000011, whole genome shotgun sequence 5,401
JAGGYF010000030.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000045, whole genome shotgun sequence 22,865
JAGGYF010000031.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000036, whole genome shotgun sequence 42,807
JAGGYF010000032.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000047, whole genome shotgun sequence 8,134
JAGGYF010000033.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000022, whole genome shotgun sequence 21,432
JAGGYF010000034.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000031, whole genome shotgun sequence 34,766
JAGGYF010000035.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000007, whole genome shotgun sequence 37,363
JAGGYF010000036.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000014, whole genome shotgun sequence 36,339
JAGGYF010000037.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000027, whole genome shotgun sequence 11,785
JAGGYF010000038.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000037, whole genome shotgun sequence 35,981
JAGGYF010000039.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000015, whole genome shotgun sequence 4,094
JAGGYF010000040.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000009, whole genome shotgun sequence 6,902
JAGGYF010000041.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000001, whole genome shotgun sequence 26,519
JAGGYF010000042.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000018, whole genome shotgun sequence 34,177
JAGGYF010000043.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000008, whole genome shotgun sequence 21,099
JAGGYF010000044.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000024, whole genome shotgun sequence 43,066
JAGGYF010000045.1 MAG: Candidatus Diapherotrites archaeon isolate AUK171 PB_MBMC_125_c_000000000043, whole genome shotgun sequence 7,535

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory