fast.genomicscompare 6,575 genera of bacteria & archaea

 

Faeciplasma sp021201235 MO.2_2

Genome identifier: GCA_021201235.1

NCBI assembly name: ASM2120123v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Faeciplasma, Faeciplasma sp021201235

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae

Scaffolds: 33

Genes: 1,980 Protein-coding: 1,890 RNAs: 54 pseudogenes: 36

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAJQFI010000001.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_4143_length_2561_cov_145.878691, whole genome shotgun sequence 2,561
JAJQFI010000002.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_2997_length_3191_cov_97.928571, whole genome shotgun sequence 3,191
JAJQFI010000003.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_35_length_89327_cov_94.397381, whole genome shotgun sequence 89,327
JAJQFI010000004.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_823_length_7709_cov_103.552391, whole genome shotgun sequence 7,709
JAJQFI010000005.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_1193_length_5885_cov_204.076329, whole genome shotgun sequence 5,885
JAJQFI010000006.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_66_length_50800_cov_93.014662, whole genome shotgun sequence 50,800
JAJQFI010000007.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3616_length_2820_cov_156.198915, whole genome shotgun sequence 2,820
JAJQFI010000008.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_8_length_309802_cov_92.097166, whole genome shotgun sequence 309,802
JAJQFI010000009.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3254_length_3030_cov_72.229580, whole genome shotgun sequence 3,030
JAJQFI010000010.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_277_length_18018_cov_121.680955, whole genome shotgun sequence 18,018
JAJQFI010000011.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_2319_length_3790_cov_105.264257, whole genome shotgun sequence 3,790
JAJQFI010000012.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_4246_length_2519_cov_139.412338, whole genome shotgun sequence 2,519
JAJQFI010000013.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_738_length_8183_cov_225.954970, whole genome shotgun sequence 8,183
JAJQFI010000014.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_526_length_10620_cov_81.624420, whole genome shotgun sequence 10,620
JAJQFI010000015.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_77_length_45146_cov_118.964272, whole genome shotgun sequence 45,146
JAJQFI010000016.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_4_length_363174_cov_80.436675, whole genome shotgun sequence 363,174
JAJQFI010000017.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_1695_length_4720_cov_92.086602, whole genome shotgun sequence 4,720
JAJQFI010000018.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_94_length_40035_cov_98.116933, whole genome shotgun sequence 40,035
JAJQFI010000019.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_2561_length_3550_cov_92.189986, whole genome shotgun sequence 3,550
JAJQFI010000020.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_9_length_268255_cov_89.993147, whole genome shotgun sequence 268,255
JAJQFI010000021.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_945_length_6985_cov_163.943146, whole genome shotgun sequence 6,985
JAJQFI010000022.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3511_length_2874_cov_205.693863, whole genome shotgun sequence 2,874
JAJQFI010000023.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_921_length_7133_cov_110.743006, whole genome shotgun sequence 7,133
JAJQFI010000024.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_2_length_388777_cov_81.491755, whole genome shotgun sequence 388,777
JAJQFI010000025.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_10_length_212265_cov_95.510631, whole genome shotgun sequence 212,265
JAJQFI010000026.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_340_length_15122_cov_102.466516, whole genome shotgun sequence 15,122
JAJQFI010000027.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_14_length_160896_cov_86.263030, whole genome shotgun sequence 160,896
JAJQFI010000028.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_338_length_15205_cov_113.629439, whole genome shotgun sequence 15,205
JAJQFI010000029.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3361_length_2963_cov_336.427442, whole genome shotgun sequence 2,963
JAJQFI010000030.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3598_length_2828_cov_45.597187, whole genome shotgun sequence 2,828
JAJQFI010000031.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3622_length_2816_cov_130.708077, whole genome shotgun sequence 2,816
JAJQFI010000032.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_2638_length_3468_cov_218.433636, whole genome shotgun sequence 3,468
JAJQFI010000033.1 MAG: Oscillospiraceae bacterium isolate MO.2_2 NODE_3396_length_2940_cov_100.948581, whole genome shotgun sequence 2,940

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory