fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lentiprolixibacter sp021295155 D16

Genome identifier: GCA_021295155.1

NCBI assembly name: ASM2129515v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Lentiprolixibacter, Lentiprolixibacter sp021295155

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae

Scaffolds: 36

Genes: 2,981 Protein-coding: 2,916 RNAs: 54 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAJTJC010000001.1 Flavobacteriaceae bacterium D16 NODE_28_length_235_cov_44.245763, whole genome shotgun sequence 235
JAJTJC010000002.1 Flavobacteriaceae bacterium D16 NODE_26_length_235_cov_51.389831, whole genome shotgun sequence 235
JAJTJC010000003.1 Flavobacteriaceae bacterium D16 NODE_25_length_235_cov_80.762712, whole genome shotgun sequence 235
JAJTJC010000004.1 Flavobacteriaceae bacterium D16 NODE_24_length_235_cov_90.694915, whole genome shotgun sequence 235
JAJTJC010000005.1 Flavobacteriaceae bacterium D16 NODE_23_length_238_cov_41.702479, whole genome shotgun sequence 238
JAJTJC010000006.1 Flavobacteriaceae bacterium D16 NODE_36_length_213_cov_95.302083, whole genome shotgun sequence 213
JAJTJC010000007.1 Flavobacteriaceae bacterium D16 NODE_30_length_235_cov_29.847458, whole genome shotgun sequence 235
JAJTJC010000008.1 Flavobacteriaceae bacterium D16 NODE_20_length_255_cov_87.637681, whole genome shotgun sequence 255
JAJTJC010000009.1 Flavobacteriaceae bacterium D16 NODE_14_length_379_cov_27.362595, whole genome shotgun sequence 379
JAJTJC010000010.1 Flavobacteriaceae bacterium D16 NODE_32_length_235_cov_25.203390, whole genome shotgun sequence 235
JAJTJC010000011.1 Flavobacteriaceae bacterium D16 NODE_33_length_229_cov_49.392857, whole genome shotgun sequence 229
JAJTJC010000012.1 Flavobacteriaceae bacterium D16 NODE_34_length_229_cov_44.330357, whole genome shotgun sequence 229
JAJTJC010000013.1 Flavobacteriaceae bacterium D16 NODE_21_length_250_cov_24.451128, whole genome shotgun sequence 250
JAJTJC010000014.1 Flavobacteriaceae bacterium D16 NODE_31_length_235_cov_28.754237, whole genome shotgun sequence 235
JAJTJC010000015.1 Flavobacteriaceae bacterium D16 NODE_35_length_221_cov_69.644231, whole genome shotgun sequence 221
JAJTJC010000016.1 Flavobacteriaceae bacterium D16 NODE_19_length_295_cov_67.252809, whole genome shotgun sequence 295
JAJTJC010000017.1 Flavobacteriaceae bacterium D16 NODE_29_length_235_cov_40.474576, whole genome shotgun sequence 235
JAJTJC010000018.1 Flavobacteriaceae bacterium D16 NODE_18_length_308_cov_48.921466, whole genome shotgun sequence 308
JAJTJC010000019.1 Flavobacteriaceae bacterium D16 NODE_22_length_250_cov_21.654135, whole genome shotgun sequence 250
JAJTJC010000020.1 Flavobacteriaceae bacterium D16 NODE_27_length_235_cov_50.940678, whole genome shotgun sequence 234
JAJTJC010000021.1 Flavobacteriaceae bacterium D16 NODE_17_length_324_cov_22.188406, whole genome shotgun sequence 324
JAJTJC010000022.1 Flavobacteriaceae bacterium D16 NODE_15_length_377_cov_52.476923, whole genome shotgun sequence 377
JAJTJC010000023.1 Flavobacteriaceae bacterium D16 NODE_16_length_366_cov_70.333333, whole genome shotgun sequence 366
JAJTJC010000024.1 Flavobacteriaceae bacterium D16 NODE_13_length_466_cov_119.255014, whole genome shotgun sequence 466
JAJTJC010000025.1 Flavobacteriaceae bacterium D16 NODE_10_length_785_cov_81.528443, whole genome shotgun sequence 785
JAJTJC010000026.1 Flavobacteriaceae bacterium D16 NODE_12_length_668_cov_160.179673, whole genome shotgun sequence 668
JAJTJC010000027.1 Flavobacteriaceae bacterium D16 NODE_11_length_722_cov_54.595041, whole genome shotgun sequence 722
JAJTJC010000028.1 Flavobacteriaceae bacterium D16 NODE_8_length_1711_cov_98.117942, whole genome shotgun sequence 1,711
JAJTJC010000029.1 Flavobacteriaceae bacterium D16 NODE_7_length_2794_cov_91.979455, whole genome shotgun sequence 2,794
JAJTJC010000030.1 Flavobacteriaceae bacterium D16 NODE_9_length_1411_cov_27.838485, whole genome shotgun sequence 1,411
JAJTJC010000031.1 Flavobacteriaceae bacterium D16 NODE_6_length_19817_cov_55.439137, whole genome shotgun sequence 19,817
JAJTJC010000032.1 Flavobacteriaceae bacterium D16 NODE_5_length_97988_cov_57.514463, whole genome shotgun sequence 97,988
JAJTJC010000033.1 Flavobacteriaceae bacterium D16 NODE_4_length_150651_cov_58.199709, whole genome shotgun sequence 150,651
JAJTJC010000034.1 Flavobacteriaceae bacterium D16 NODE_3_length_281750_cov_55.898737, whole genome shotgun sequence 281,750
JAJTJC010000035.1 Flavobacteriaceae bacterium D16 NODE_2_length_1270024_cov_57.733651, whole genome shotgun sequence 1,270,021
JAJTJC010000036.1 Flavobacteriaceae bacterium D16 NODE_1_length_1390805_cov_67.462257, whole genome shotgun sequence 1,390,806

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory