fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAJTCH01 sp021323225 C_No_T20_B_bin.69

Genome identifier: GCA_021323225.1

NCBI assembly name: ASM2132322v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, UBA1997, JAJTCH01, JAJTCH01 sp021323225

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rickettsiales, Rickettsiaceae

Scaffolds: 6

Genes: 1,411 Protein-coding: 1,411 RNAs: 0 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAJTCH010000001.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_B_bin.69 scaffold_8, whole genome shotgun sequence 766,990
JAJTCH010000002.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_B_bin.69 scaffold_30, whole genome shotgun sequence 341,201
JAJTCH010000003.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_B_bin.69 scaffold_45, whole genome shotgun sequence 176,554
JAJTCH010000004.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_B_bin.69 scaffold_56, whole genome shotgun sequence 154,552
JAJTCH010000005.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_B_bin.69 scaffold_158, whole genome shotgun sequence 78,631
JAJTCH010000006.1 MAG: Rickettsiaceae bacterium isolate C_No_T20_B_bin.69 scaffold_331, whole genome shotgun sequence 68,656

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory