fast.genomicscompare 6,575 genera of bacteria & archaea

 

B6-G9 sp021647205 D100SM.bin.7

Genome identifier: GCA_021647205.1

NCBI assembly name: ASM2164720v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, F082, B6-G9, B6-G9 sp021647205

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales

Scaffolds: 46

Genes: 2,888 Protein-coding: 2,820 RNAs: 49 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKIVD010000001.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_2_length_333224_cov_7.310375, whole genome shotgun sequence 333,224
JAKIVD010000002.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_10_length_199877_cov_7.628242, whole genome shotgun sequence 199,877
JAKIVD010000003.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_13_length_190371_cov_6.572817, whole genome shotgun sequence 190,371
JAKIVD010000004.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_20_length_162315_cov_7.520991, whole genome shotgun sequence 162,315
JAKIVD010000005.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_23_length_156040_cov_6.377499, whole genome shotgun sequence 156,040
JAKIVD010000006.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_24_length_149780_cov_7.767769, whole genome shotgun sequence 149,780
JAKIVD010000007.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_27_length_147530_cov_6.383222, whole genome shotgun sequence 147,530
JAKIVD010000008.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_33_length_137941_cov_6.492889, whole genome shotgun sequence 137,941
JAKIVD010000009.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_37_length_134129_cov_7.382651, whole genome shotgun sequence 134,129
JAKIVD010000010.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_38_length_132397_cov_6.444931, whole genome shotgun sequence 132,397
JAKIVD010000011.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_45_length_123919_cov_6.537111, whole genome shotgun sequence 123,919
JAKIVD010000012.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_49_length_117109_cov_6.594866, whole genome shotgun sequence 117,109
JAKIVD010000013.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_52_length_115514_cov_6.422613, whole genome shotgun sequence 115,514
JAKIVD010000014.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_64_length_102851_cov_6.718118, whole genome shotgun sequence 102,851
JAKIVD010000015.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_65_length_101886_cov_6.471259, whole genome shotgun sequence 101,886
JAKIVD010000016.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_113_length_83558_cov_7.192159, whole genome shotgun sequence 83,558
JAKIVD010000017.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_121_length_80576_cov_6.286989, whole genome shotgun sequence 80,576
JAKIVD010000018.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_125_length_79324_cov_8.156067, whole genome shotgun sequence 79,324
JAKIVD010000019.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_128_length_78154_cov_7.574946, whole genome shotgun sequence 78,154
JAKIVD010000020.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_159_length_71503_cov_7.303491, whole genome shotgun sequence 71,503
JAKIVD010000021.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_167_length_70001_cov_6.936629, whole genome shotgun sequence 70,001
JAKIVD010000022.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_170_length_69640_cov_7.947593, whole genome shotgun sequence 69,640
JAKIVD010000023.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_211_length_61681_cov_6.581763, whole genome shotgun sequence 61,681
JAKIVD010000024.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_236_length_58225_cov_6.802059, whole genome shotgun sequence 58,225
JAKIVD010000025.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_310_length_49822_cov_7.183781, whole genome shotgun sequence 49,822
JAKIVD010000026.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_316_length_49353_cov_6.273737, whole genome shotgun sequence 49,353
JAKIVD010000027.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_319_length_48647_cov_6.480730, whole genome shotgun sequence 48,647
JAKIVD010000028.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_329_length_47778_cov_6.364027, whole genome shotgun sequence 47,778
JAKIVD010000029.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_335_length_47523_cov_7.285678, whole genome shotgun sequence 47,523
JAKIVD010000030.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_444_length_39980_cov_7.064186, whole genome shotgun sequence 39,980
JAKIVD010000031.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_476_length_38523_cov_7.353735, whole genome shotgun sequence 38,523
JAKIVD010000032.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_528_length_36304_cov_5.793819, whole genome shotgun sequence 36,304
JAKIVD010000033.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_627_length_32016_cov_7.142902, whole genome shotgun sequence 32,016
JAKIVD010000034.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_671_length_30392_cov_6.638196, whole genome shotgun sequence 30,392
JAKIVD010000035.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_871_length_24337_cov_7.809500, whole genome shotgun sequence 24,337
JAKIVD010000036.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_931_length_23078_cov_8.067404, whole genome shotgun sequence 23,078
JAKIVD010000037.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_957_length_22651_cov_6.958489, whole genome shotgun sequence 22,651
JAKIVD010000038.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_1015_length_21588_cov_6.857323, whole genome shotgun sequence 21,588
JAKIVD010000039.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_1603_length_14599_cov_5.079256, whole genome shotgun sequence 14,599
JAKIVD010000040.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_2521_length_9619_cov_7.258007, whole genome shotgun sequence 9,619
JAKIVD010000041.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_2626_length_9293_cov_6.061423, whole genome shotgun sequence 9,293
JAKIVD010000042.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_2739_length_8978_cov_5.880366, whole genome shotgun sequence 8,978
JAKIVD010000043.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_3817_length_6879_cov_5.938537, whole genome shotgun sequence 6,879
JAKIVD010000044.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_6438_length_4754_cov_3.674303, whole genome shotgun sequence 4,754
JAKIVD010000045.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_6842_length_4569_cov_8.351418, whole genome shotgun sequence 4,569
JAKIVD010000046.1 MAG: Bacteroidales bacterium isolate D100SM.bin.7 NODE_21019_length_2246_cov_2.475224, whole genome shotgun sequence 2,246

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory