fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAANXI01 sp021734025 Tobar15.5-16.5m-G39

Genome identifier: GCA_021734025.1

NCBI assembly name: ASM2173402v1

GTDB taxonomy: Bacteria, Marinisomatota, JAANXI01, JAANXI01, JAANXI01, JAANXI01, JAANXI01 sp021734025

NCBI taxonomy: Bacteria, Candidatus Marinimicrobia

Scaffolds: 35

Genes: 3,558 Protein-coding: 3,483 RNAs: 55 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIPJS010000001.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C1, whole genome shotgun sequence 567,072
JAIPJS010000002.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C2, whole genome shotgun sequence 470,042
JAIPJS010000003.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C4, whole genome shotgun sequence 376,699
JAIPJS010000004.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C5, whole genome shotgun sequence 374,091
JAIPJS010000005.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C7, whole genome shotgun sequence 260,132
JAIPJS010000006.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C11, whole genome shotgun sequence 212,768
JAIPJS010000007.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C14, whole genome shotgun sequence 199,058
JAIPJS010000008.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C19, whole genome shotgun sequence 161,727
JAIPJS010000009.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C27, whole genome shotgun sequence 142,389
JAIPJS010000010.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C28, whole genome shotgun sequence 142,203
JAIPJS010000011.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C29, whole genome shotgun sequence 140,322
JAIPJS010000012.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C30, whole genome shotgun sequence 140,284
JAIPJS010000013.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C41, whole genome shotgun sequence 116,827
JAIPJS010000014.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C65, whole genome shotgun sequence 97,699
JAIPJS010000015.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C75, whole genome shotgun sequence 91,564
JAIPJS010000016.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C89, whole genome shotgun sequence 86,090
JAIPJS010000017.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C109, whole genome shotgun sequence 81,124
JAIPJS010000018.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C124, whole genome shotgun sequence 75,925
JAIPJS010000019.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C142, whole genome shotgun sequence 73,245
JAIPJS010000020.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C159, whole genome shotgun sequence 70,234
JAIPJS010000021.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C163, whole genome shotgun sequence 69,902
JAIPJS010000022.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C246, whole genome shotgun sequence 57,311
JAIPJS010000023.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C256, whole genome shotgun sequence 56,508
JAIPJS010000024.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C270, whole genome shotgun sequence 55,489
JAIPJS010000025.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C321, whole genome shotgun sequence 50,338
JAIPJS010000026.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C431, whole genome shotgun sequence 43,959
JAIPJS010000027.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C494, whole genome shotgun sequence 41,256
JAIPJS010000028.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C535, whole genome shotgun sequence 39,397
JAIPJS010000029.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C602, whole genome shotgun sequence 37,186
JAIPJS010000030.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C977, whole genome shotgun sequence 28,521
JAIPJS010000031.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C1039, whole genome shotgun sequence 27,557
JAIPJS010000032.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C2223, whole genome shotgun sequence 17,554
JAIPJS010000033.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C2754, whole genome shotgun sequence 15,322
JAIPJS010000034.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C3594, whole genome shotgun sequence 12,811
JAIPJS010000035.1 MAG: Candidatus Neomarinimicrobiota bacterium isolate Tobar15.5-16.5m-G39 Tobar15-5-16-5m-C12787, whole genome shotgun sequence 5,079

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory