fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAIPBD01 sp021739765 Tobar13m-G18

Genome identifier: GCA_021739765.1

NCBI assembly name: ASM2173976v1

GTDB taxonomy: Bacteria, Bacteroidota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae, JAIPBD01, JAIPBD01 sp021739765

NCBI taxonomy: Bacteria, Ignavibacteriota, Ignavibacteria, Ignavibacteriales, Melioribacteraceae

Scaffolds: 37

Genes: 3,776 Protein-coding: 3,721 RNAs: 46 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAIPBD010000001.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C10, whole genome shotgun sequence 425,485
JAIPBD010000002.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C13, whole genome shotgun sequence 403,639
JAIPBD010000003.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C14, whole genome shotgun sequence 385,377
JAIPBD010000004.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C20, whole genome shotgun sequence 356,520
JAIPBD010000005.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C65, whole genome shotgun sequence 206,263
JAIPBD010000006.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C73, whole genome shotgun sequence 195,137
JAIPBD010000007.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C83, whole genome shotgun sequence 188,003
JAIPBD010000008.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C84, whole genome shotgun sequence 187,875
JAIPBD010000009.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C124, whole genome shotgun sequence 163,710
JAIPBD010000010.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C137, whole genome shotgun sequence 151,942
JAIPBD010000011.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C152, whole genome shotgun sequence 144,369
JAIPBD010000012.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C165, whole genome shotgun sequence 139,284
JAIPBD010000013.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C172, whole genome shotgun sequence 135,575
JAIPBD010000014.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C202, whole genome shotgun sequence 123,953
JAIPBD010000015.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C205, whole genome shotgun sequence 121,766
JAIPBD010000016.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C239, whole genome shotgun sequence 111,454
JAIPBD010000017.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C265, whole genome shotgun sequence 106,488
JAIPBD010000018.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C321, whole genome shotgun sequence 94,967
JAIPBD010000019.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C424, whole genome shotgun sequence 80,241
JAIPBD010000020.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C453, whole genome shotgun sequence 76,810
JAIPBD010000021.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C537, whole genome shotgun sequence 70,359
JAIPBD010000022.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C588, whole genome shotgun sequence 66,555
JAIPBD010000023.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C599, whole genome shotgun sequence 65,625
JAIPBD010000024.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C629, whole genome shotgun sequence 63,290
JAIPBD010000025.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C687, whole genome shotgun sequence 59,995
JAIPBD010000026.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C885, whole genome shotgun sequence 50,939
JAIPBD010000027.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C927, whole genome shotgun sequence 49,561
JAIPBD010000028.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C954, whole genome shotgun sequence 48,063
JAIPBD010000029.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C968, whole genome shotgun sequence 47,458
JAIPBD010000030.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C1190, whole genome shotgun sequence 39,787
JAIPBD010000031.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C1405, whole genome shotgun sequence 35,325
JAIPBD010000032.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C1433, whole genome shotgun sequence 34,877
JAIPBD010000033.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C1460, whole genome shotgun sequence 34,537
JAIPBD010000034.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C2092, whole genome shotgun sequence 25,928
JAIPBD010000035.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C3713, whole genome shotgun sequence 16,033
JAIPBD010000036.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C3938, whole genome shotgun sequence 15,236
JAIPBD010000037.1 MAG: Melioribacteraceae bacterium isolate Tobar13m-G18 Tobar13m-C4286, whole genome shotgun sequence 14,096

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory