fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAKVBI01 sp022447545 ALOHA_ZT_24

Genome identifier: GCA_022447545.1

NCBI assembly name: ASM2244754v1

GTDB taxonomy: Bacteria, Myxococcota_A, UBA9160, UBA9160, SMWR01, JAKVBI01, JAKVBI01 sp022447545

NCBI taxonomy: Bacteria, Myxococcota

Scaffolds: 57

Genes: 5,040 Protein-coding: 4,959 RNAs: 52 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKVBI010000001.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_1, whole genome shotgun sequence 427,435
JAKVBI010000002.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_2, whole genome shotgun sequence 293,259
JAKVBI010000003.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_3, whole genome shotgun sequence 196,228
JAKVBI010000004.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_4, whole genome shotgun sequence 164,504
JAKVBI010000005.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_5, whole genome shotgun sequence 299,951
JAKVBI010000006.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_6, whole genome shotgun sequence 144,387
JAKVBI010000007.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_7, whole genome shotgun sequence 153,621
JAKVBI010000008.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_8, whole genome shotgun sequence 107,555
JAKVBI010000009.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_9, whole genome shotgun sequence 99,932
JAKVBI010000010.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_10, whole genome shotgun sequence 538,031
JAKVBI010000011.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_11, whole genome shotgun sequence 380,397
JAKVBI010000012.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_12, whole genome shotgun sequence 249,253
JAKVBI010000013.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_13, whole genome shotgun sequence 234,798
JAKVBI010000014.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_14, whole genome shotgun sequence 229,970
JAKVBI010000015.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_15, whole genome shotgun sequence 188,387
JAKVBI010000016.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_16, whole genome shotgun sequence 180,373
JAKVBI010000017.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_17, whole genome shotgun sequence 179,887
JAKVBI010000018.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_18, whole genome shotgun sequence 177,667
JAKVBI010000019.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_19, whole genome shotgun sequence 150,192
JAKVBI010000020.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_20, whole genome shotgun sequence 136,978
JAKVBI010000021.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_21, whole genome shotgun sequence 126,027
JAKVBI010000022.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_22, whole genome shotgun sequence 120,931
JAKVBI010000023.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_23, whole genome shotgun sequence 110,201
JAKVBI010000024.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_24, whole genome shotgun sequence 107,148
JAKVBI010000025.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_25, whole genome shotgun sequence 97,682
JAKVBI010000026.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_26, whole genome shotgun sequence 94,060
JAKVBI010000027.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_27, whole genome shotgun sequence 85,531
JAKVBI010000028.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_28, whole genome shotgun sequence 81,125
JAKVBI010000029.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_29, whole genome shotgun sequence 80,766
JAKVBI010000030.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_30, whole genome shotgun sequence 56,808
JAKVBI010000031.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_31, whole genome shotgun sequence 51,097
JAKVBI010000032.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_32, whole genome shotgun sequence 47,242
JAKVBI010000033.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_33, whole genome shotgun sequence 43,326
JAKVBI010000034.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_34, whole genome shotgun sequence 40,672
JAKVBI010000035.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_35, whole genome shotgun sequence 40,653
JAKVBI010000036.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_36, whole genome shotgun sequence 36,557
JAKVBI010000037.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_37, whole genome shotgun sequence 28,153
JAKVBI010000038.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_38, whole genome shotgun sequence 19,976
JAKVBI010000039.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_39, whole genome shotgun sequence 15,423
JAKVBI010000040.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_40, whole genome shotgun sequence 15,100
JAKVBI010000041.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_41, whole genome shotgun sequence 15,010
JAKVBI010000042.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_42, whole genome shotgun sequence 14,367
JAKVBI010000043.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_43, whole genome shotgun sequence 8,801
JAKVBI010000044.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_44, whole genome shotgun sequence 8,329
JAKVBI010000045.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_45, whole genome shotgun sequence 5,306
JAKVBI010000046.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_46, whole genome shotgun sequence 4,358
JAKVBI010000047.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_47, whole genome shotgun sequence 3,871
JAKVBI010000048.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_48, whole genome shotgun sequence 3,316
JAKVBI010000049.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_49, whole genome shotgun sequence 2,710
JAKVBI010000050.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_50, whole genome shotgun sequence 2,506
JAKVBI010000051.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_51, whole genome shotgun sequence 2,173
JAKVBI010000052.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_52, whole genome shotgun sequence 1,936
JAKVBI010000053.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_53, whole genome shotgun sequence 1,576
JAKVBI010000054.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_54, whole genome shotgun sequence 1,850
JAKVBI010000055.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_55, whole genome shotgun sequence 1,640
JAKVBI010000056.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_56, whole genome shotgun sequence 1,638
JAKVBI010000057.1 MAG: Myxococcota bacterium isolate ALOHA_ZT_24 ZT-Myxococcota-1_57, whole genome shotgun sequence 1,606

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory