fast.genomicscompare 6,575 genera of bacteria & archaea

 

GCA-2722455 sp002722455 ALOHA_A2.5_116

Genome identifier: GCA_022447765.1

NCBI assembly name: ASM2244776v1

GTDB taxonomy: Bacteria, Chloroflexota, Dehalococcoidia, SAR202, GCA-2722455, GCA-2722455, GCA-2722455 sp002722455

NCBI taxonomy: Bacteria, Chloroflexota

Scaffolds: 40

Genes: 1,420 Protein-coding: 1,361 RNAs: 46 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKUTV010000001.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_1, whole genome shotgun sequence 307,108
JAKUTV010000002.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_2, whole genome shotgun sequence 198,001
JAKUTV010000003.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_3, whole genome shotgun sequence 81,273
JAKUTV010000004.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_4, whole genome shotgun sequence 77,174
JAKUTV010000005.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_5, whole genome shotgun sequence 64,418
JAKUTV010000006.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_6, whole genome shotgun sequence 63,668
JAKUTV010000007.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_7, whole genome shotgun sequence 55,561
JAKUTV010000008.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_8, whole genome shotgun sequence 54,776
JAKUTV010000009.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_9, whole genome shotgun sequence 52,103
JAKUTV010000010.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_10, whole genome shotgun sequence 42,514
JAKUTV010000011.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_11, whole genome shotgun sequence 41,930
JAKUTV010000012.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_12, whole genome shotgun sequence 38,181
JAKUTV010000013.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_13, whole genome shotgun sequence 37,524
JAKUTV010000014.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_14, whole genome shotgun sequence 36,398
JAKUTV010000015.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_15, whole genome shotgun sequence 32,822
JAKUTV010000016.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_16, whole genome shotgun sequence 28,892
JAKUTV010000017.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_17, whole genome shotgun sequence 22,785
JAKUTV010000018.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_18, whole genome shotgun sequence 20,545
JAKUTV010000019.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_19, whole genome shotgun sequence 20,501
JAKUTV010000020.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_20, whole genome shotgun sequence 19,270
JAKUTV010000021.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_21, whole genome shotgun sequence 18,844
JAKUTV010000022.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_22, whole genome shotgun sequence 14,403
JAKUTV010000023.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_23, whole genome shotgun sequence 13,892
JAKUTV010000024.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_24, whole genome shotgun sequence 12,690
JAKUTV010000025.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_25, whole genome shotgun sequence 10,687
JAKUTV010000026.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_26, whole genome shotgun sequence 10,282
JAKUTV010000027.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_27, whole genome shotgun sequence 7,589
JAKUTV010000028.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_28, whole genome shotgun sequence 6,873
JAKUTV010000029.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_29, whole genome shotgun sequence 5,803
JAKUTV010000030.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_30, whole genome shotgun sequence 3,915
JAKUTV010000031.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_31, whole genome shotgun sequence 3,846
JAKUTV010000032.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_32, whole genome shotgun sequence 3,467
JAKUTV010000033.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_33, whole genome shotgun sequence 3,324
JAKUTV010000034.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_34, whole genome shotgun sequence 3,137
JAKUTV010000035.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_35, whole genome shotgun sequence 2,925
JAKUTV010000036.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_36, whole genome shotgun sequence 2,747
JAKUTV010000037.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_37, whole genome shotgun sequence 2,125
JAKUTV010000038.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_38, whole genome shotgun sequence 1,896
JAKUTV010000039.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_39, whole genome shotgun sequence 1,831
JAKUTV010000040.1 MAG: SAR202 cluster bacterium isolate ALOHA_A2.5_116 A2.5-SAR202-6_40, whole genome shotgun sequence 1,640

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory