fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA6952 sp002450515 ALOHA_A2.5_17

Genome identifier: GCA_022450525.1

NCBI assembly name: ASM2245052v1

GTDB taxonomy: Bacteria, Chloroflexota, Dehalococcoidia, UBA6952, UBA6952, UBA6952, UBA6952 sp002450515

NCBI taxonomy: Bacteria, Chloroflexota, Dehalococcoidia

Scaffolds: 25

Genes: 1,300 Protein-coding: 1,257 RNAs: 38 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKUQA010000001.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_1, whole genome shotgun sequence 162,906
JAKUQA010000002.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_2, whole genome shotgun sequence 144,490
JAKUQA010000003.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_3, whole genome shotgun sequence 93,117
JAKUQA010000004.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_4, whole genome shotgun sequence 73,203
JAKUQA010000005.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_5, whole genome shotgun sequence 69,007
JAKUQA010000006.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_6, whole genome shotgun sequence 66,255
JAKUQA010000007.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_7, whole genome shotgun sequence 65,410
JAKUQA010000008.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_8, whole genome shotgun sequence 62,096
JAKUQA010000009.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_9, whole genome shotgun sequence 61,276
JAKUQA010000010.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_10, whole genome shotgun sequence 51,553
JAKUQA010000011.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_11, whole genome shotgun sequence 43,346
JAKUQA010000012.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_12, whole genome shotgun sequence 40,666
JAKUQA010000013.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_13, whole genome shotgun sequence 40,345
JAKUQA010000014.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_14, whole genome shotgun sequence 40,131
JAKUQA010000015.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_15, whole genome shotgun sequence 38,053
JAKUQA010000016.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_16, whole genome shotgun sequence 38,008
JAKUQA010000017.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_17, whole genome shotgun sequence 31,334
JAKUQA010000018.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_18, whole genome shotgun sequence 26,652
JAKUQA010000019.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_19, whole genome shotgun sequence 25,846
JAKUQA010000020.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_20, whole genome shotgun sequence 21,679
JAKUQA010000021.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_21, whole genome shotgun sequence 17,205
JAKUQA010000022.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_22, whole genome shotgun sequence 11,560
JAKUQA010000023.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_23, whole genome shotgun sequence 9,564
JAKUQA010000024.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_24, whole genome shotgun sequence 2,647
JAKUQA010000025.1 MAG: Dehalococcoidia bacterium isolate ALOHA_A2.5_17 A2.5-Dehalococcoidia-15_25, whole genome shotgun sequence 1,864

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory