fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA57 sp002494565 ALOHA_A2.5_78

Genome identifier: GCA_022451545.1

NCBI assembly name: ASM2245154v1

GTDB taxonomy: Archaea, Thermoproteota, Nitrososphaeria, Nitrososphaerales, UBA57, UBA57, UBA57 sp002494565

NCBI taxonomy: Archaea, Nitrososphaerota, Nitrososphaeria, Nitrososphaerales

Scaffolds: 33

Genes: 1,129 Protein-coding: 1,085 RNAs: 44 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKUSJ010000001.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_1, whole genome shotgun sequence 198,224
JAKUSJ010000002.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_2, whole genome shotgun sequence 128,704
JAKUSJ010000003.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_3, whole genome shotgun sequence 109,830
JAKUSJ010000004.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_4, whole genome shotgun sequence 106,655
JAKUSJ010000005.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_5, whole genome shotgun sequence 96,051
JAKUSJ010000006.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_6, whole genome shotgun sequence 86,308
JAKUSJ010000007.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_7, whole genome shotgun sequence 59,206
JAKUSJ010000008.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_8, whole genome shotgun sequence 52,563
JAKUSJ010000009.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_9, whole genome shotgun sequence 28,118
JAKUSJ010000010.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_10, whole genome shotgun sequence 25,902
JAKUSJ010000011.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_11, whole genome shotgun sequence 17,822
JAKUSJ010000012.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_12, whole genome shotgun sequence 8,633
JAKUSJ010000013.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_13, whole genome shotgun sequence 7,933
JAKUSJ010000014.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_14, whole genome shotgun sequence 4,433
JAKUSJ010000015.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_15, whole genome shotgun sequence 3,639
JAKUSJ010000016.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_16, whole genome shotgun sequence 3,084
JAKUSJ010000017.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_17, whole genome shotgun sequence 2,942
JAKUSJ010000018.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_18, whole genome shotgun sequence 2,791
JAKUSJ010000019.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_19, whole genome shotgun sequence 2,740
JAKUSJ010000020.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_20, whole genome shotgun sequence 2,593
JAKUSJ010000021.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_21, whole genome shotgun sequence 2,468
JAKUSJ010000022.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_22, whole genome shotgun sequence 2,415
JAKUSJ010000023.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_23, whole genome shotgun sequence 2,311
JAKUSJ010000024.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_24, whole genome shotgun sequence 1,978
JAKUSJ010000025.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_25, whole genome shotgun sequence 2,127
JAKUSJ010000026.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_26, whole genome shotgun sequence 2,105
JAKUSJ010000027.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_27, whole genome shotgun sequence 2,044
JAKUSJ010000028.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_28, whole genome shotgun sequence 1,728
JAKUSJ010000029.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_29, whole genome shotgun sequence 1,691
JAKUSJ010000030.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_30, whole genome shotgun sequence 1,686
JAKUSJ010000031.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_31, whole genome shotgun sequence 1,599
JAKUSJ010000032.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_32, whole genome shotgun sequence 1,504
JAKUSJ010000033.1 MAG: Nitrososphaerales archaeon isolate ALOHA_A2.5_78 A2.5-Nitrososphaerales-2_33, whole genome shotgun sequence 1,504

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory