fast.genomicscompare 6,575 genera of bacteria & archaea

 

RZYO01 sp022482625 UW_MP_SPH1_1

Genome identifier: GCA_022482625.1

NCBI assembly name: ASM2248262v1

GTDB taxonomy: Bacteria, Spirochaetota, Spirochaetia, Sphaerochaetales, Sphaerochaetaceae, RZYO01, RZYO01 sp022482625

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia

Scaffolds: 3

Genes: 3,151 Protein-coding: 3,004 RNAs: 74 pseudogenes: 73

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKVOU010000001.1 MAG: Spirochaetia bacterium isolate UW_MP_SPH1_1 Ga0455828_0001, whole genome shotgun sequence 3,408,794
JAKVOU010000002.1 MAG: Spirochaetia bacterium isolate UW_MP_SPH1_1 Ga0455828_0457, whole genome shotgun sequence 33,218
JAKVOU010000003.1 MAG: Spirochaetia bacterium isolate UW_MP_SPH1_1 Ga0455828_0570, whole genome shotgun sequence 25,506

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory