fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA4285 sp900314255 UW_TS_LCO2_1

Genome identifier: GCA_022483505.1

NCBI assembly name: ASM2248350v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, UBA4285, UBA4285 sp900314255

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 2

Genes: 2,708 Protein-coding: 2,571 RNAs: 67 pseudogenes: 70

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKVND010000001.1 MAG: Lachnospiraceae bacterium isolate UW_TS_LCO2_1 Ga0455837_007, whole genome shotgun sequence 2,295,570
JAKVND010000002.1 MAG: Lachnospiraceae bacterium isolate UW_TS_LCO2_1 Ga0455837_023, whole genome shotgun sequence 663,443

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory