fast.genomicscompare 6,575 genera of bacteria & archaea

 

SMWN01 sp004356415 B40T1B8

Genome identifier: GCA_022565215.1

NCBI assembly name: ASM2256521v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, UBA4486, UBA4486, SMWN01, SMWN01 sp004356415

NCBI taxonomy: Bacteria, Pseudomonadota

Scaffolds: 105

Genes: 2,682 Protein-coding: 2,607 RNAs: 52 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JADFJF010000001.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE126, whole genome shotgun sequence 131,965
JADFJF010000002.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE169, whole genome shotgun sequence 117,263
JADFJF010000003.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE175, whole genome shotgun sequence 115,783
JADFJF010000004.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE211, whole genome shotgun sequence 106,628
JADFJF010000005.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE217, whole genome shotgun sequence 104,955
JADFJF010000006.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE306, whole genome shotgun sequence 87,506
JADFJF010000007.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE318, whole genome shotgun sequence 86,605
JADFJF010000008.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE455, whole genome shotgun sequence 73,171
JADFJF010000009.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE514, whole genome shotgun sequence 68,303
JADFJF010000010.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE553, whole genome shotgun sequence 64,942
JADFJF010000011.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE671, whole genome shotgun sequence 59,182
JADFJF010000012.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE686, whole genome shotgun sequence 58,334
JADFJF010000013.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE768, whole genome shotgun sequence 54,687
JADFJF010000014.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE879, whole genome shotgun sequence 50,598
JADFJF010000015.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE890, whole genome shotgun sequence 50,042
JADFJF010000016.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE903, whole genome shotgun sequence 49,772
JADFJF010000017.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE993, whole genome shotgun sequence 46,972
JADFJF010000018.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1021, whole genome shotgun sequence 46,211
JADFJF010000019.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1313, whole genome shotgun sequence 40,670
JADFJF010000020.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1445, whole genome shotgun sequence 38,650
JADFJF010000021.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1453, whole genome shotgun sequence 38,580
JADFJF010000022.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1629, whole genome shotgun sequence 36,315
JADFJF010000023.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1818, whole genome shotgun sequence 34,027
JADFJF010000024.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1958, whole genome shotgun sequence 32,511
JADFJF010000025.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE1992, whole genome shotgun sequence 32,205
JADFJF010000026.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2032, whole genome shotgun sequence 31,904
JADFJF010000027.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2046, whole genome shotgun sequence 31,749
JADFJF010000028.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2093, whole genome shotgun sequence 31,409
JADFJF010000029.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2287, whole genome shotgun sequence 29,770
JADFJF010000030.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2318, whole genome shotgun sequence 29,589
JADFJF010000031.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2400, whole genome shotgun sequence 29,063
JADFJF010000032.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2522, whole genome shotgun sequence 28,323
JADFJF010000033.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2642, whole genome shotgun sequence 27,541
JADFJF010000034.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE2927, whole genome shotgun sequence 26,062
JADFJF010000035.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3130, whole genome shotgun sequence 24,953
JADFJF010000036.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3322, whole genome shotgun sequence 24,177
JADFJF010000037.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3377, whole genome shotgun sequence 23,985
JADFJF010000038.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3630, whole genome shotgun sequence 22,947
JADFJF010000039.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3732, whole genome shotgun sequence 22,474
JADFJF010000040.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3938, whole genome shotgun sequence 21,728
JADFJF010000041.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE3957, whole genome shotgun sequence 21,656
JADFJF010000042.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE4074, whole genome shotgun sequence 21,267
JADFJF010000043.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE4297, whole genome shotgun sequence 20,586
JADFJF010000044.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE4435, whole genome shotgun sequence 20,205
JADFJF010000045.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE4436, whole genome shotgun sequence 20,200
JADFJF010000046.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE4519, whole genome shotgun sequence 19,960
JADFJF010000047.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE4840, whole genome shotgun sequence 19,150
JADFJF010000048.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE5136, whole genome shotgun sequence 18,477
JADFJF010000049.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE7108, whole genome shotgun sequence 15,114
JADFJF010000050.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE7123, whole genome shotgun sequence 15,102
JADFJF010000051.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE7233, whole genome shotgun sequence 14,957
JADFJF010000052.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE7253, whole genome shotgun sequence 14,935
JADFJF010000053.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE8083, whole genome shotgun sequence 13,904
JADFJF010000054.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE8208, whole genome shotgun sequence 13,772
JADFJF010000055.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE8227, whole genome shotgun sequence 13,751
JADFJF010000056.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE8453, whole genome shotgun sequence 13,506
JADFJF010000057.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE8946, whole genome shotgun sequence 13,043
JADFJF010000058.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE8977, whole genome shotgun sequence 13,019
JADFJF010000059.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE9876, whole genome shotgun sequence 12,263
JADFJF010000060.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE10417, whole genome shotgun sequence 11,864
JADFJF010000061.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE10591, whole genome shotgun sequence 11,745
JADFJF010000062.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE10608, whole genome shotgun sequence 11,732
JADFJF010000063.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE11180, whole genome shotgun sequence 11,345
JADFJF010000064.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE11249, whole genome shotgun sequence 11,304
JADFJF010000065.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE12163, whole genome shotgun sequence 10,751
JADFJF010000066.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE12214, whole genome shotgun sequence 10,716
JADFJF010000067.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE12429, whole genome shotgun sequence 10,583
JADFJF010000068.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE12616, whole genome shotgun sequence 10,485
JADFJF010000069.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE13827, whole genome shotgun sequence 9,904
JADFJF010000070.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE13886, whole genome shotgun sequence 9,879
JADFJF010000071.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE14043, whole genome shotgun sequence 9,804
JADFJF010000072.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE14125, whole genome shotgun sequence 9,768
JADFJF010000073.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE14603, whole genome shotgun sequence 9,570
JADFJF010000074.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE15078, whole genome shotgun sequence 9,370
JADFJF010000075.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE16601, whole genome shotgun sequence 8,797
JADFJF010000076.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE17256, whole genome shotgun sequence 8,582
JADFJF010000077.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE18425, whole genome shotgun sequence 8,218
JADFJF010000078.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE18677, whole genome shotgun sequence 8,153
JADFJF010000079.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE18906, whole genome shotgun sequence 8,083
JADFJF010000080.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE20007, whole genome shotgun sequence 7,780
JADFJF010000081.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE20749, whole genome shotgun sequence 7,586
JADFJF010000082.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE22916, whole genome shotgun sequence 7,090
JADFJF010000083.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE26607, whole genome shotgun sequence 6,400
JADFJF010000084.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE28515, whole genome shotgun sequence 6,103
JADFJF010000085.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE29538, whole genome shotgun sequence 5,954
JADFJF010000086.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE29813, whole genome shotgun sequence 5,914
JADFJF010000087.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE29904, whole genome shotgun sequence 5,900
JADFJF010000088.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE30018, whole genome shotgun sequence 5,884
JADFJF010000089.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE32291, whole genome shotgun sequence 5,583
JADFJF010000090.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE33490, whole genome shotgun sequence 5,441
JADFJF010000091.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE33604, whole genome shotgun sequence 5,429
JADFJF010000092.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE34410, whole genome shotgun sequence 5,345
JADFJF010000093.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE35313, whole genome shotgun sequence 5,248
JADFJF010000094.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE36233, whole genome shotgun sequence 5,153
JADFJF010000095.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE36831, whole genome shotgun sequence 5,094
JADFJF010000096.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE44422, whole genome shotgun sequence 4,451
JADFJF010000097.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE44936, whole genome shotgun sequence 4,413
JADFJF010000098.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE49632, whole genome shotgun sequence 4,111
JADFJF010000099.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE53778, whole genome shotgun sequence 3,881
JADFJF010000100.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE55002, whole genome shotgun sequence 3,819
JADFJF010000101.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE55594, whole genome shotgun sequence 3,789
JADFJF010000102.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE59488, whole genome shotgun sequence 3,608
JADFJF010000103.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE62371, whole genome shotgun sequence 3,485
JADFJF010000104.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE82373, whole genome shotgun sequence 2,840
JADFJF010000105.1 MAG: Proteobacteria bacterium isolate B40T1B8 B40T1B8_NODE99961, whole genome shotgun sequence 2,470

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory