fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFUYI01 sp900542055 SUG249

Genome identifier: GCA_022764005.1

NCBI assembly name: ASM2276400v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, RF32, CAG-239, JAFUYI01, JAFUYI01 sp900542055

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Azospirillaceae, Azospirillum

Scaffolds: 20

Genes: 1,528 Protein-coding: 1,473 RNAs: 50 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JALEQS010000001.1 MAG: Azospirillum sp. isolate SUG249 k141_172011, whole genome shotgun sequence 63,728
JALEQS010000002.1 MAG: Azospirillum sp. isolate SUG249 k141_400325, whole genome shotgun sequence 103,114
JALEQS010000003.1 MAG: Azospirillum sp. isolate SUG249 k141_158173, whole genome shotgun sequence 2,263
JALEQS010000004.1 MAG: Azospirillum sp. isolate SUG249 k141_145007, whole genome shotgun sequence 2,837
JALEQS010000005.1 MAG: Azospirillum sp. isolate SUG249 k141_145160, whole genome shotgun sequence 4,801
JALEQS010000006.1 MAG: Azospirillum sp. isolate SUG249 k141_401937, whole genome shotgun sequence 55,700
JALEQS010000007.1 MAG: Azospirillum sp. isolate SUG249 k141_118392, whole genome shotgun sequence 201,888
JALEQS010000008.1 MAG: Azospirillum sp. isolate SUG249 k141_403175, whole genome shotgun sequence 60,338
JALEQS010000009.1 MAG: Azospirillum sp. isolate SUG249 k141_318477, whole genome shotgun sequence 48,288
JALEQS010000010.1 MAG: Azospirillum sp. isolate SUG249 k141_33123, whole genome shotgun sequence 147,061
JALEQS010000011.1 MAG: Azospirillum sp. isolate SUG249 k141_460891, whole genome shotgun sequence 86,834
JALEQS010000012.1 MAG: Azospirillum sp. isolate SUG249 k141_490243, whole genome shotgun sequence 6,504
JALEQS010000013.1 MAG: Azospirillum sp. isolate SUG249 k141_234865, whole genome shotgun sequence 80,527
JALEQS010000014.1 MAG: Azospirillum sp. isolate SUG249 k141_278380, whole genome shotgun sequence 96,223
JALEQS010000015.1 MAG: Azospirillum sp. isolate SUG249 k141_280416, whole genome shotgun sequence 124,511
JALEQS010000016.1 MAG: Azospirillum sp. isolate SUG249 k141_354109, whole genome shotgun sequence 205,191
JALEQS010000017.1 MAG: Azospirillum sp. isolate SUG249 k141_112407, whole genome shotgun sequence 98,073
JALEQS010000018.1 MAG: Azospirillum sp. isolate SUG249 k141_397845, whole genome shotgun sequence 34,687
JALEQS010000019.1 MAG: Azospirillum sp. isolate SUG249 k141_227616, whole genome shotgun sequence 11,112
JALEQS010000020.1 MAG: Azospirillum sp. isolate SUG249 k141_355735, whole genome shotgun sequence 83,268

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory