fast.genomics – compare 6,575 genera of bacteria & archaea

 

Neoanaerotignum_A sp022867625 NSJ-143

Genome identifier: GCA_022867625.1

NCBI assembly name: ASM2286762v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Anaerotignaceae, Neoanaerotignum_A, Neoanaerotignum_A sp022867625

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae

Scaffolds: 14

Genes: 2,519 Protein-coding: 2,431 RNAs: 64 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JALIFM010000001.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg01, whole genome shotgun sequence 727,936
JALIFM010000002.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg02, whole genome shotgun sequence 537,429
JALIFM010000003.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg03, whole genome shotgun sequence 338,300
JALIFM010000004.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg04, whole genome shotgun sequence 233,282
JALIFM010000005.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg05, whole genome shotgun sequence 197,319
JALIFM010000006.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg06, whole genome shotgun sequence 160,855
JALIFM010000007.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg07, whole genome shotgun sequence 156,802
JALIFM010000008.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg08, whole genome shotgun sequence 133,100
JALIFM010000009.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg09, whole genome shotgun sequence 90,610
JALIFM010000010.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg10, whole genome shotgun sequence 85,397
JALIFM010000011.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg11, whole genome shotgun sequence 3,070
JALIFM010000012.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg12, whole genome shotgun sequence 1,341
JALIFM010000013.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg13, whole genome shotgun sequence 609
JALIFM010000014.1 Lachnospiraceae bacterium NSJ-143 D5.70.1_ctg14, whole genome shotgun sequence 577

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory