fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAKLKO01 sp023150615 MAG.52

Genome identifier: GCA_023150615.1

NCBI assembly name: ASM2315061v1

GTDB taxonomy: Bacteria, Planctomycetota, Phycisphaerae, UBA1845, UTPLA1, JAKLKO01, JAKLKO01 sp023150615

NCBI taxonomy: Bacteria, Planctomycetota, Phycisphaerae

Scaffolds: 70

Genes: 3,447 Protein-coding: 3,359 RNAs: 55 pseudogenes: 33

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JAKLKO010000001.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_1_length_503891_cov_7.035577, whole genome shotgun sequence 503,891
JAKLKO010000002.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_2_length_360774_cov_7.187138, whole genome shotgun sequence 360,774
JAKLKO010000003.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_3_length_269552_cov_6.981200, whole genome shotgun sequence 269,552
JAKLKO010000004.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_4_length_227959_cov_7.065218, whole genome shotgun sequence 227,959
JAKLKO010000005.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_5_length_216976_cov_7.287894, whole genome shotgun sequence 216,976
JAKLKO010000006.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_6_length_203127_cov_7.063896, whole genome shotgun sequence 203,127
JAKLKO010000007.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_7_length_187589_cov_7.095669, whole genome shotgun sequence 187,589
JAKLKO010000008.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_8_length_165701_cov_7.023831, whole genome shotgun sequence 165,701
JAKLKO010000009.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_9_length_149416_cov_6.682621, whole genome shotgun sequence 149,416
JAKLKO010000010.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_10_length_145846_cov_7.233616, whole genome shotgun sequence 145,846
JAKLKO010000011.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_11_length_135807_cov_6.678980, whole genome shotgun sequence 135,807
JAKLKO010000012.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_12_length_134575_cov_7.416066, whole genome shotgun sequence 134,575
JAKLKO010000013.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_13_length_134346_cov_7.209698, whole genome shotgun sequence 134,346
JAKLKO010000014.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_14_length_113272_cov_6.838376, whole genome shotgun sequence 113,272
JAKLKO010000015.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_15_length_85624_cov_6.631080, whole genome shotgun sequence 85,624
JAKLKO010000016.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_16_length_83915_cov_7.278979, whole genome shotgun sequence 83,915
JAKLKO010000017.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_17_length_82892_cov_6.798756, whole genome shotgun sequence 82,892
JAKLKO010000018.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_18_length_77218_cov_7.449450, whole genome shotgun sequence 77,218
JAKLKO010000019.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_19_length_73494_cov_6.969380, whole genome shotgun sequence 73,494
JAKLKO010000020.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_20_length_71544_cov_7.427624, whole genome shotgun sequence 71,544
JAKLKO010000021.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_21_length_70679_cov_7.113070, whole genome shotgun sequence 70,679
JAKLKO010000022.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_22_length_70171_cov_7.145804, whole genome shotgun sequence 70,171
JAKLKO010000023.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_23_length_67460_cov_6.992698, whole genome shotgun sequence 67,460
JAKLKO010000024.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_24_length_65788_cov_6.821080, whole genome shotgun sequence 65,788
JAKLKO010000025.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_25_length_54603_cov_6.640025, whole genome shotgun sequence 54,603
JAKLKO010000026.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_26_length_48054_cov_6.797320, whole genome shotgun sequence 48,054
JAKLKO010000027.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_27_length_42586_cov_7.181420, whole genome shotgun sequence 42,586
JAKLKO010000028.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_28_length_29779_cov_7.032792, whole genome shotgun sequence 29,779
JAKLKO010000029.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_29_length_27697_cov_6.800724, whole genome shotgun sequence 27,697
JAKLKO010000030.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_30_length_27577_cov_6.674036, whole genome shotgun sequence 27,577
JAKLKO010000031.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_31_length_24812_cov_7.361391, whole genome shotgun sequence 24,812
JAKLKO010000032.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_32_length_21022_cov_7.686178, whole genome shotgun sequence 21,022
JAKLKO010000033.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_33_length_16122_cov_6.202431, whole genome shotgun sequence 16,122
JAKLKO010000034.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_34_length_15505_cov_6.728092, whole genome shotgun sequence 15,505
JAKLKO010000035.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_35_length_14801_cov_7.025129, whole genome shotgun sequence 14,801
JAKLKO010000036.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_36_length_13378_cov_6.117059, whole genome shotgun sequence 13,378
JAKLKO010000037.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_37_length_12819_cov_5.916811, whole genome shotgun sequence 12,819
JAKLKO010000038.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_38_length_7687_cov_8.423522, whole genome shotgun sequence 7,687
JAKLKO010000039.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_39_length_5772_cov_6.362072, whole genome shotgun sequence 5,772
JAKLKO010000040.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_40_length_4743_cov_4.896271, whole genome shotgun sequence 4,743
JAKLKO010000041.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_41_length_4293_cov_5.193074, whole genome shotgun sequence 4,293
JAKLKO010000042.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_42_length_2920_cov_2.781569, whole genome shotgun sequence 2,920
JAKLKO010000043.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_43_length_2875_cov_3.484632, whole genome shotgun sequence 2,875
JAKLKO010000044.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_44_length_2821_cov_5.658528, whole genome shotgun sequence 2,821
JAKLKO010000045.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_45_length_2680_cov_8.936612, whole genome shotgun sequence 2,680
JAKLKO010000046.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_46_length_2560_cov_6.123641, whole genome shotgun sequence 2,560
JAKLKO010000047.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_47_length_2399_cov_4.763566, whole genome shotgun sequence 2,399
JAKLKO010000048.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_48_length_1908_cov_5.066084, whole genome shotgun sequence 1,908
JAKLKO010000049.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_49_length_1630_cov_5.533806, whole genome shotgun sequence 1,630
JAKLKO010000050.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_50_length_1532_cov_7.861856, whole genome shotgun sequence 1,532
JAKLKO010000051.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_51_length_1298_cov_5.691237, whole genome shotgun sequence 1,298
JAKLKO010000052.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_52_length_916_cov_7.713945, whole genome shotgun sequence 916
JAKLKO010000053.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_53_length_795_cov_2.172702, whole genome shotgun sequence 795
JAKLKO010000054.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_54_length_750_cov_6.572065, whole genome shotgun sequence 750
JAKLKO010000055.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_55_length_722_cov_1.376744, whole genome shotgun sequence 722
JAKLKO010000056.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_56_length_660_cov_2.327616, whole genome shotgun sequence 660
JAKLKO010000057.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_57_length_658_cov_2.165232, whole genome shotgun sequence 658
JAKLKO010000058.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_58_length_638_cov_6.032086, whole genome shotgun sequence 638
JAKLKO010000059.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_59_length_619_cov_2.003690, whole genome shotgun sequence 619
JAKLKO010000060.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_60_length_602_cov_11.664762, whole genome shotgun sequence 602
JAKLKO010000061.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_61_length_573_cov_11.189516, whole genome shotgun sequence 573
JAKLKO010000062.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_62_length_544_cov_1.426124, whole genome shotgun sequence 544
JAKLKO010000063.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_63_length_539_cov_0.984848, whole genome shotgun sequence 539
JAKLKO010000064.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_64_length_534_cov_9.214442, whole genome shotgun sequence 534
JAKLKO010000065.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_65_length_526_cov_4.481069, whole genome shotgun sequence 526
JAKLKO010000066.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_66_length_523_cov_1.811659, whole genome shotgun sequence 523
JAKLKO010000067.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_67_length_523_cov_1.493274, whole genome shotgun sequence 523
JAKLKO010000068.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_68_length_522_cov_3.330337, whole genome shotgun sequence 522
JAKLKO010000069.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_69_length_502_cov_7.320000, whole genome shotgun sequence 502
JAKLKO010000070.1 MAG: Phycisphaerae bacterium isolate MAG.52 MAG.52-NODE_70_length_500_cov_3.148936, whole genome shotgun sequence 500

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory