fast.genomicscompare 6,575 genera of bacteria & archaea

 

CAIWKO01 sp023228145 SO_2017_LW3 bin 87

Genome identifier: GCA_023228145.1

NCBI assembly name: ASM2322814v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, CAIWKO01, CAIWKO01, CAIWKO01 sp023228145

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales

Scaffolds: 56

Genes: 2,687 Protein-coding: 2,608 RNAs: 55 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JALOBU010000001.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_69_length_223779_cov_2.897448_LW162_2017, whole genome shotgun sequence 223,779
JALOBU010000002.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_86_length_204606_cov_2.843177_LW162_2017, whole genome shotgun sequence 204,606
JALOBU010000003.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_97_length_192389_cov_2.801261_LW162_2017, whole genome shotgun sequence 192,389
JALOBU010000004.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_107_length_182115_cov_2.744615_LW162_2017, whole genome shotgun sequence 182,115
JALOBU010000005.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_124_length_167694_cov_2.673414_LW162_2017, whole genome shotgun sequence 167,694
JALOBU010000006.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_184_length_138327_cov_2.752388_LW162_2017, whole genome shotgun sequence 138,327
JALOBU010000007.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_202_length_134662_cov_3.110090_LW162_2017, whole genome shotgun sequence 134,662
JALOBU010000008.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_239_length_124639_cov_3.183123_LW162_2017, whole genome shotgun sequence 124,639
JALOBU010000009.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_260_length_120412_cov_2.735071_LW162_2017, whole genome shotgun sequence 120,412
JALOBU010000010.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_271_length_118020_cov_3.107877_LW162_2017, whole genome shotgun sequence 118,020
JALOBU010000011.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_277_length_115831_cov_2.943978_LW162_2017, whole genome shotgun sequence 115,831
JALOBU010000012.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_308_length_111248_cov_3.062499_LW162_2017, whole genome shotgun sequence 111,248
JALOBU010000013.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_395_length_99586_cov_2.647252_LW162_2017, whole genome shotgun sequence 99,586
JALOBU010000014.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_576_length_81904_cov_2.588503_LW162_2017, whole genome shotgun sequence 81,904
JALOBU010000015.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_643_length_77369_cov_2.444124_LW162_2017, whole genome shotgun sequence 77,369
JALOBU010000016.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_869_length_65615_cov_2.790236_LW162_2017, whole genome shotgun sequence 65,615
JALOBU010000017.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1048_length_59415_cov_2.606345_LW162_2017, whole genome shotgun sequence 59,415
JALOBU010000018.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1249_length_54022_cov_2.434679_LW162_2017, whole genome shotgun sequence 54,022
JALOBU010000019.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1261_length_53810_cov_2.719073_LW162_2017, whole genome shotgun sequence 53,810
JALOBU010000020.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1329_length_52562_cov_3.205187_LW162_2017, whole genome shotgun sequence 52,562
JALOBU010000021.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1362_length_51938_cov_2.043234_LW162_2017, whole genome shotgun sequence 51,938
JALOBU010000022.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1373_length_51536_cov_2.966115_LW162_2017, whole genome shotgun sequence 51,536
JALOBU010000023.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_1715_length_46206_cov_2.642527_LW162_2017, whole genome shotgun sequence 46,206
JALOBU010000024.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2037_length_42618_cov_2.934057_LW162_2017, whole genome shotgun sequence 42,618
JALOBU010000025.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2084_length_42121_cov_2.727652_LW162_2017, whole genome shotgun sequence 42,121
JALOBU010000026.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2096_length_41969_cov_2.403781_LW162_2017, whole genome shotgun sequence 41,969
JALOBU010000027.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2249_length_40444_cov_3.119726_LW162_2017, whole genome shotgun sequence 40,444
JALOBU010000028.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2317_length_39848_cov_2.950228_LW162_2017, whole genome shotgun sequence 39,848
JALOBU010000029.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2319_length_39832_cov_2.917139_LW162_2017, whole genome shotgun sequence 39,832
JALOBU010000030.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2458_length_38613_cov_2.361404_LW162_2017, whole genome shotgun sequence 38,613
JALOBU010000031.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2574_length_37802_cov_2.527618_LW162_2017, whole genome shotgun sequence 37,802
JALOBU010000032.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_2759_length_36115_cov_2.901551_LW162_2017, whole genome shotgun sequence 36,115
JALOBU010000033.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_3062_length_34009_cov_3.021988_LW162_2017, whole genome shotgun sequence 34,009
JALOBU010000034.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_3104_length_33718_cov_3.197583_LW162_2017, whole genome shotgun sequence 33,718
JALOBU010000035.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_3366_length_32052_cov_3.393892_LW162_2017, whole genome shotgun sequence 32,052
JALOBU010000036.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_3722_length_30020_cov_2.621851_LW162_2017, whole genome shotgun sequence 30,020
JALOBU010000037.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_4582_length_26536_cov_2.759703_LW162_2017, whole genome shotgun sequence 26,536
JALOBU010000038.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_6966_length_20335_cov_2.784640_LW162_2017, whole genome shotgun sequence 20,335
JALOBU010000039.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_7572_length_19271_cov_2.472263_LW162_2017, whole genome shotgun sequence 19,271
JALOBU010000040.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_12420_length_14103_cov_2.950487_LW162_2017, whole genome shotgun sequence 14,103
JALOBU010000041.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_16742_length_11683_cov_2.167532_LW162_2017, whole genome shotgun sequence 11,683
JALOBU010000042.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_20099_length_10403_cov_2.675944_LW162_2017, whole genome shotgun sequence 10,403
JALOBU010000043.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_32571_length_7612_cov_2.834202_LW162_2017, whole genome shotgun sequence 7,612
JALOBU010000044.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_35174_length_7253_cov_2.888156_LW162_2017, whole genome shotgun sequence 7,253
JALOBU010000045.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_39191_length_6776_cov_1.803730_LW162_2017, whole genome shotgun sequence 6,776
JALOBU010000046.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_41529_length_6529_cov_2.948766_LW162_2017, whole genome shotgun sequence 6,529
JALOBU010000047.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_42994_length_6388_cov_2.711707_LW162_2017, whole genome shotgun sequence 6,388
JALOBU010000048.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_99222_length_3728_cov_2.725354_LW162_2017, whole genome shotgun sequence 3,728
JALOBU010000049.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_100400_length_3700_cov_2.702211_LW162_2017, whole genome shotgun sequence 3,700
JALOBU010000050.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_108600_length_3515_cov_1.603306_LW162_2017, whole genome shotgun sequence 3,515
JALOBU010000051.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_119200_length_3313_cov_3.280917_LW162_2017, whole genome shotgun sequence 3,313
JALOBU010000052.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_137786_length_3021_cov_0.751900_LW162_2017, whole genome shotgun sequence 3,021
JALOBU010000053.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_146805_length_2900_cov_0.955283_LW162_2017, whole genome shotgun sequence 2,900
JALOBU010000054.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_152694_length_2827_cov_3.185926_LW162_2017, whole genome shotgun sequence 2,827
JALOBU010000055.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_161834_length_2722_cov_5.517148_LW162_2017, whole genome shotgun sequence 2,722
JALOBU010000056.1 MAG: Bacteroidales bacterium isolate SO_2017_LW3 bin 87 NODE_169187_length_2645_cov_3.084591_LW162_2017, whole genome shotgun sequence 2,645

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory