fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAGOPY01 sp023229505 SO_2017_GW3 bin 21

Genome identifier: GCA_023229505.1

NCBI assembly name: ASM2322950v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, JAGOPY01, JAGOPY01, JAGOPY01 sp023229505

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales

Scaffolds: 109

Genes: 3,491 Protein-coding: 3,395 RNAs: 57 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JALNZD010000001.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_84_c1_OW296A_2017, whole genome shotgun sequence 197,293
JALNZD010000002.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_100_c1_OW296A_2017, whole genome shotgun sequence 184,117
JALNZD010000003.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_107_c1_OW296A_2017, whole genome shotgun sequence 174,175
JALNZD010000004.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_123_c1_OW296A_2017, whole genome shotgun sequence 156,146
JALNZD010000005.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_137_c1_OW296A_2017, whole genome shotgun sequence 142,396
JALNZD010000006.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_151_c1_OW296A_2017, whole genome shotgun sequence 132,250
JALNZD010000007.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_170_c1_OW296A_2017, whole genome shotgun sequence 121,829
JALNZD010000008.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_185_c1_OW296A_2017, whole genome shotgun sequence 113,326
JALNZD010000009.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_240_c1_OW296A_2017, whole genome shotgun sequence 93,772
JALNZD010000010.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_246_c1_OW296A_2017, whole genome shotgun sequence 92,587
JALNZD010000011.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_250_c1_OW296A_2017, whole genome shotgun sequence 91,456
JALNZD010000012.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_251_c1_OW296A_2017, whole genome shotgun sequence 91,444
JALNZD010000013.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_253_c1_OW296A_2017, whole genome shotgun sequence 91,269
JALNZD010000014.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_256_c1_OW296A_2017, whole genome shotgun sequence 90,829
JALNZD010000015.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_302_c1_OW296A_2017, whole genome shotgun sequence 80,597
JALNZD010000016.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_331_c1_OW296A_2017, whole genome shotgun sequence 74,699
JALNZD010000017.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_332_c1_OW296A_2017, whole genome shotgun sequence 74,694
JALNZD010000018.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_338_c1_OW296A_2017, whole genome shotgun sequence 73,802
JALNZD010000019.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_352_c1_OW296A_2017, whole genome shotgun sequence 70,926
JALNZD010000020.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_355_c1_OW296A_2017, whole genome shotgun sequence 70,590
JALNZD010000021.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_363_c1_OW296A_2017, whole genome shotgun sequence 69,736
JALNZD010000022.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_463_c1_OW296A_2017, whole genome shotgun sequence 57,929
JALNZD010000023.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_468_c1_OW296A_2017, whole genome shotgun sequence 57,303
JALNZD010000024.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_472_c1_OW296A_2017, whole genome shotgun sequence 57,148
JALNZD010000025.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_473_c1_OW296A_2017, whole genome shotgun sequence 57,142
JALNZD010000026.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_474_c1_OW296A_2017, whole genome shotgun sequence 56,965
JALNZD010000027.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_486_c1_OW296A_2017, whole genome shotgun sequence 55,969
JALNZD010000028.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_492_c1_OW296A_2017, whole genome shotgun sequence 55,180
JALNZD010000029.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_494_c1_OW296A_2017, whole genome shotgun sequence 55,057
JALNZD010000030.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_519_c1_OW296A_2017, whole genome shotgun sequence 52,361
JALNZD010000031.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_570_c1_OW296A_2017, whole genome shotgun sequence 48,487
JALNZD010000032.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_583_c1_OW296A_2017, whole genome shotgun sequence 47,608
JALNZD010000033.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_626_c1_OW296A_2017, whole genome shotgun sequence 44,311
JALNZD010000034.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_630_c1_OW296A_2017, whole genome shotgun sequence 44,144
JALNZD010000035.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_641_c1_OW296A_2017, whole genome shotgun sequence 43,551
JALNZD010000036.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_673_c1_OW296A_2017, whole genome shotgun sequence 41,410
JALNZD010000037.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_719_c1_OW296A_2017, whole genome shotgun sequence 39,212
JALNZD010000038.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_732_c1_OW296A_2017, whole genome shotgun sequence 38,685
JALNZD010000039.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_738_c1_OW296A_2017, whole genome shotgun sequence 38,522
JALNZD010000040.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_744_c1_OW296A_2017, whole genome shotgun sequence 38,284
JALNZD010000041.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_761_c1_OW296A_2017, whole genome shotgun sequence 37,096
JALNZD010000042.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_801_c1_OW296A_2017, whole genome shotgun sequence 35,227
JALNZD010000043.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_804_c1_OW296A_2017, whole genome shotgun sequence 35,120
JALNZD010000044.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_809_c1_OW296A_2017, whole genome shotgun sequence 34,965
JALNZD010000045.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_812_c1_OW296A_2017, whole genome shotgun sequence 34,801
JALNZD010000046.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_839_c1_OW296A_2017, whole genome shotgun sequence 33,751
JALNZD010000047.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_848_c1_OW296A_2017, whole genome shotgun sequence 33,411
JALNZD010000048.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_904_c1_OW296A_2017, whole genome shotgun sequence 31,321
JALNZD010000049.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_907_c1_OW296A_2017, whole genome shotgun sequence 31,286
JALNZD010000050.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_918_c1_OW296A_2017, whole genome shotgun sequence 31,027
JALNZD010000051.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1002_c1_OW296A_2017, whole genome shotgun sequence 28,237
JALNZD010000052.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1114_c1_OW296A_2017, whole genome shotgun sequence 25,902
JALNZD010000053.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1126_c1_OW296A_2017, whole genome shotgun sequence 25,713
JALNZD010000054.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1201_c1_OW296A_2017, whole genome shotgun sequence 24,442
JALNZD010000055.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1233_c1_OW296A_2017, whole genome shotgun sequence 23,879
JALNZD010000056.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1240_c1_OW296A_2017, whole genome shotgun sequence 23,745
JALNZD010000057.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1306_c1_OW296A_2017, whole genome shotgun sequence 22,501
JALNZD010000058.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1317_c1_OW296A_2017, whole genome shotgun sequence 22,395
JALNZD010000059.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1318_c1_OW296A_2017, whole genome shotgun sequence 22,379
JALNZD010000060.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1342_c1_OW296A_2017, whole genome shotgun sequence 21,977
JALNZD010000061.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1814_c1_OW296A_2017, whole genome shotgun sequence 16,969
JALNZD010000062.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_1819_c1_OW296A_2017, whole genome shotgun sequence 16,925
JALNZD010000063.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2119_c1_OW296A_2017, whole genome shotgun sequence 14,725
JALNZD010000064.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2370_c1_OW296A_2017, whole genome shotgun sequence 13,227
JALNZD010000065.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2675_c1_OW296A_2017, whole genome shotgun sequence 11,976
JALNZD010000066.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2695_c1_OW296A_2017, whole genome shotgun sequence 11,924
JALNZD010000067.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2758_c1_OW296A_2017, whole genome shotgun sequence 11,719
JALNZD010000068.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2816_c1_OW296A_2017, whole genome shotgun sequence 11,508
JALNZD010000069.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_2848_c1_OW296A_2017, whole genome shotgun sequence 11,397
JALNZD010000070.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3197_c1_OW296A_2017, whole genome shotgun sequence 10,327
JALNZD010000071.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3245_c1_OW296A_2017, whole genome shotgun sequence 10,186
JALNZD010000072.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3403_c1_OW296A_2017, whole genome shotgun sequence 9,795
JALNZD010000073.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3528_c1_OW296A_2017, whole genome shotgun sequence 9,554
JALNZD010000074.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3679_c1_OW296A_2017, whole genome shotgun sequence 9,247
JALNZD010000075.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3922_c1_OW296A_2017, whole genome shotgun sequence 8,750
JALNZD010000076.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_3925_c1_OW296A_2017, whole genome shotgun sequence 8,744
JALNZD010000077.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_4070_c1_OW296A_2017, whole genome shotgun sequence 8,531
JALNZD010000078.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_4189_c1_OW296A_2017, whole genome shotgun sequence 8,326
JALNZD010000079.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_4820_c1_OW296A_2017, whole genome shotgun sequence 7,434
JALNZD010000080.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_5658_c1_OW296A_2017, whole genome shotgun sequence 6,572
JALNZD010000081.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_6249_c1_OW296A_2017, whole genome shotgun sequence 6,044
JALNZD010000082.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_6592_c1_OW296A_2017, whole genome shotgun sequence 5,801
JALNZD010000083.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_6716_c1_OW296A_2017, whole genome shotgun sequence 5,731
JALNZD010000084.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_6240_c2_OW296A_2017, whole genome shotgun sequence 5,637
JALNZD010000085.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_8723_c1_OW296A_2017, whole genome shotgun sequence 4,670
JALNZD010000086.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_8853_c1_OW296A_2017, whole genome shotgun sequence 4,613
JALNZD010000087.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_9584_c1_OW296A_2017, whole genome shotgun sequence 4,331
JALNZD010000088.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_9709_c1_OW296A_2017, whole genome shotgun sequence 4,290
JALNZD010000089.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_7122_c2_OW296A_2017, whole genome shotgun sequence 4,108
JALNZD010000090.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_10371_c1_OW296A_2017, whole genome shotgun sequence 4,066
JALNZD010000091.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_10398_c1_OW296A_2017, whole genome shotgun sequence 4,060
JALNZD010000092.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_10600_c1_OW296A_2017, whole genome shotgun sequence 4,000
JALNZD010000093.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_10667_c1_OW296A_2017, whole genome shotgun sequence 3,981
JALNZD010000094.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_11893_c1_OW296A_2017, whole genome shotgun sequence 3,659
JALNZD010000095.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_12128_c1_OW296A_2017, whole genome shotgun sequence 3,604
JALNZD010000096.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_12416_c1_OW296A_2017, whole genome shotgun sequence 3,541
JALNZD010000097.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_12420_c1_OW296A_2017, whole genome shotgun sequence 3,540
JALNZD010000098.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_13084_c1_OW296A_2017, whole genome shotgun sequence 3,407
JALNZD010000099.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_13827_c1_OW296A_2017, whole genome shotgun sequence 3,269
JALNZD010000100.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_8105_c2_OW296A_2017, whole genome shotgun sequence 3,094
JALNZD010000101.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_14946_c1_OW296A_2017, whole genome shotgun sequence 3,091
JALNZD010000102.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_15887_c1_OW296A_2017, whole genome shotgun sequence 2,957
JALNZD010000103.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_17760_c1_OW296A_2017, whole genome shotgun sequence 2,723
JALNZD010000104.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_17922_c1_OW296A_2017, whole genome shotgun sequence 2,706
JALNZD010000105.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_18313_c1_OW296A_2017, whole genome shotgun sequence 2,663
JALNZD010000106.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_19113_c1_OW296A_2017, whole genome shotgun sequence 2,577
JALNZD010000107.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_19505_c1_OW296A_2017, whole genome shotgun sequence 2,537
JALNZD010000108.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_19639_c1_OW296A_2017, whole genome shotgun sequence 2,523
JALNZD010000109.1 MAG: Bacteroidales bacterium isolate SO_2017_GW3 bin 21 scaffold_19858_c1_OW296A_2017, whole genome shotgun sequence 2,500

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory