fast.genomicscompare 6,575 genera of bacteria & archaea

 

JALNXB01 sp023230585 SO_2016_LW2 bin 85

Genome identifier: GCA_023230585.1

NCBI assembly name: ASM2323058v1

GTDB taxonomy: Bacteria, Ratteibacteria, UBA8468, B48-G9, JAFGKM01, JALNXB01, JALNXB01 sp023230585

NCBI taxonomy: Bacteria

Scaffolds: 115

Genes: 1,906 Protein-coding: 1,820 RNAs: 52 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JALNXB010000001.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00072_LW138R_2016, whole genome shotgun sequence 158,146
JALNXB010000002.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00185_LW138R_2016, whole genome shotgun sequence 111,848
JALNXB010000003.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00323_LW138R_2016, whole genome shotgun sequence 89,596
JALNXB010000004.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00348_LW138R_2016, whole genome shotgun sequence 85,957
JALNXB010000005.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00355_LW138R_2016, whole genome shotgun sequence 85,442
JALNXB010000006.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00469_LW138R_2016, whole genome shotgun sequence 76,307
JALNXB010000007.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold00538_LW138R_2016, whole genome shotgun sequence 71,729
JALNXB010000008.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01097_LW138R_2016, whole genome shotgun sequence 49,253
JALNXB010000009.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01207_LW138R_2016, whole genome shotgun sequence 47,022
JALNXB010000010.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01575_LW138R_2016, whole genome shotgun sequence 40,592
JALNXB010000011.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01585_LW138R_2016, whole genome shotgun sequence 40,467
JALNXB010000012.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01596_LW138R_2016, whole genome shotgun sequence 40,341
JALNXB010000013.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01810_LW138R_2016, whole genome shotgun sequence 37,076
JALNXB010000014.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01924_LW138R_2016, whole genome shotgun sequence 35,839
JALNXB010000015.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold01925_LW138R_2016, whole genome shotgun sequence 35,838
JALNXB010000016.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02023_LW138R_2016, whole genome shotgun sequence 34,818
JALNXB010000017.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02156_LW138R_2016, whole genome shotgun sequence 33,568
JALNXB010000018.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02277_LW138R_2016, whole genome shotgun sequence 32,546
JALNXB010000019.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02309_LW138R_2016, whole genome shotgun sequence 32,316
JALNXB010000020.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02334_LW138R_2016, whole genome shotgun sequence 32,091
JALNXB010000021.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02350_LW138R_2016, whole genome shotgun sequence 31,956
JALNXB010000022.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02497_LW138R_2016, whole genome shotgun sequence 30,639
JALNXB010000023.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02737_LW138R_2016, whole genome shotgun sequence 28,845
JALNXB010000024.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02761_LW138R_2016, whole genome shotgun sequence 28,714
JALNXB010000025.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02803_LW138R_2016, whole genome shotgun sequence 28,400
JALNXB010000026.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02805_LW138R_2016, whole genome shotgun sequence 28,376
JALNXB010000027.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold02958_LW138R_2016, whole genome shotgun sequence 27,449
JALNXB010000028.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold03087_LW138R_2016, whole genome shotgun sequence 26,750
JALNXB010000029.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold03384_LW138R_2016, whole genome shotgun sequence 25,346
JALNXB010000030.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold03455_LW138R_2016, whole genome shotgun sequence 25,023
JALNXB010000031.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold03499_LW138R_2016, whole genome shotgun sequence 24,868
JALNXB010000032.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold03711_LW138R_2016, whole genome shotgun sequence 23,947
JALNXB010000033.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold03874_LW138R_2016, whole genome shotgun sequence 23,406
JALNXB010000034.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold04032_LW138R_2016, whole genome shotgun sequence 22,759
JALNXB010000035.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold04466_LW138R_2016, whole genome shotgun sequence 21,413
JALNXB010000036.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold05034_LW138R_2016, whole genome shotgun sequence 19,895
JALNXB010000037.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold05066_LW138R_2016, whole genome shotgun sequence 19,831
JALNXB010000038.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold05692_LW138R_2016, whole genome shotgun sequence 18,489
JALNXB010000039.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold06040_LW138R_2016, whole genome shotgun sequence 17,786
JALNXB010000040.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold06193_LW138R_2016, whole genome shotgun sequence 17,502
JALNXB010000041.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07101_LW138R_2016, whole genome shotgun sequence 16,018
JALNXB010000042.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07262_LW138R_2016, whole genome shotgun sequence 15,794
JALNXB010000043.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07311_LW138R_2016, whole genome shotgun sequence 15,717
JALNXB010000044.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07716_LW138R_2016, whole genome shotgun sequence 15,203
JALNXB010000045.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07844_LW138R_2016, whole genome shotgun sequence 15,033
JALNXB010000046.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07897_LW138R_2016, whole genome shotgun sequence 14,986
JALNXB010000047.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold07995_LW138R_2016, whole genome shotgun sequence 14,883
JALNXB010000048.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold08072_LW138R_2016, whole genome shotgun sequence 14,778
JALNXB010000049.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold08293_LW138R_2016, whole genome shotgun sequence 14,517
JALNXB010000050.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold08352_LW138R_2016, whole genome shotgun sequence 14,455
JALNXB010000051.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold08777_LW138R_2016, whole genome shotgun sequence 13,971
JALNXB010000052.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold08889_LW138R_2016, whole genome shotgun sequence 13,849
JALNXB010000053.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold09673_LW138R_2016, whole genome shotgun sequence 13,095
JALNXB010000054.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold11590_LW138R_2016, whole genome shotgun sequence 11,628
JALNXB010000055.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold11699_LW138R_2016, whole genome shotgun sequence 11,561
JALNXB010000056.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold11778_LW138R_2016, whole genome shotgun sequence 11,512
JALNXB010000057.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold13381_LW138R_2016, whole genome shotgun sequence 10,577
JALNXB010000058.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold13537_LW138R_2016, whole genome shotgun sequence 10,494
JALNXB010000059.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold13631_LW138R_2016, whole genome shotgun sequence 10,450
JALNXB010000060.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold13673_LW138R_2016, whole genome shotgun sequence 10,429
JALNXB010000061.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold13774_LW138R_2016, whole genome shotgun sequence 10,375
JALNXB010000062.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold14203_LW138R_2016, whole genome shotgun sequence 10,169
JALNXB010000063.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold14229_LW138R_2016, whole genome shotgun sequence 10,156
JALNXB010000064.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold14628_LW138R_2016, whole genome shotgun sequence 9,964
JALNXB010000065.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold15516_LW138R_2016, whole genome shotgun sequence 9,581
JALNXB010000066.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold16001_LW138R_2016, whole genome shotgun sequence 9,364
JALNXB010000067.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold16087_LW138R_2016, whole genome shotgun sequence 9,322
JALNXB010000068.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold16363_LW138R_2016, whole genome shotgun sequence 9,215
JALNXB010000069.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold16645_LW138R_2016, whole genome shotgun sequence 9,115
JALNXB010000070.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold17044_LW138R_2016, whole genome shotgun sequence 8,960
JALNXB010000071.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold17185_LW138R_2016, whole genome shotgun sequence 8,908
JALNXB010000072.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold18293_LW138R_2016, whole genome shotgun sequence 8,537
JALNXB010000073.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold18632_LW138R_2016, whole genome shotgun sequence 8,440
JALNXB010000074.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold19124_LW138R_2016, whole genome shotgun sequence 8,296
JALNXB010000075.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold20343_LW138R_2016, whole genome shotgun sequence 7,946
JALNXB010000076.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold21790_LW138R_2016, whole genome shotgun sequence 7,572
JALNXB010000077.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold22762_LW138R_2016, whole genome shotgun sequence 7,350
JALNXB010000078.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold23754_LW138R_2016, whole genome shotgun sequence 7,132
JALNXB010000079.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold25492_LW138R_2016, whole genome shotgun sequence 6,792
JALNXB010000080.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold26557_LW138R_2016, whole genome shotgun sequence 6,602
JALNXB010000081.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold26917_LW138R_2016, whole genome shotgun sequence 6,539
JALNXB010000082.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold27228_LW138R_2016, whole genome shotgun sequence 6,486
JALNXB010000083.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold28014_LW138R_2016, whole genome shotgun sequence 6,365
JALNXB010000084.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold28546_LW138R_2016, whole genome shotgun sequence 6,276
JALNXB010000085.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold29080_LW138R_2016, whole genome shotgun sequence 6,198
JALNXB010000086.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold29308_LW138R_2016, whole genome shotgun sequence 6,165
JALNXB010000087.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold30297_LW138R_2016, whole genome shotgun sequence 6,024
JALNXB010000088.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold31124_LW138R_2016, whole genome shotgun sequence 5,913
JALNXB010000089.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold33175_LW138R_2016, whole genome shotgun sequence 5,660
JALNXB010000090.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold33316_LW138R_2016, whole genome shotgun sequence 5,642
JALNXB010000091.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold34546_LW138R_2016, whole genome shotgun sequence 5,501
JALNXB010000092.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold37334_LW138R_2016, whole genome shotgun sequence 5,207
JALNXB010000093.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold39357_LW138R_2016, whole genome shotgun sequence 5,020
JALNXB010000094.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold39865_LW138R_2016, whole genome shotgun sequence 4,977
JALNXB010000095.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold40772_LW138R_2016, whole genome shotgun sequence 4,899
JALNXB010000096.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold44012_LW138R_2016, whole genome shotgun sequence 4,647
JALNXB010000097.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold44294_LW138R_2016, whole genome shotgun sequence 4,628
JALNXB010000098.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold44720_LW138R_2016, whole genome shotgun sequence 4,598
JALNXB010000099.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold45297_LW138R_2016, whole genome shotgun sequence 4,557
JALNXB010000100.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold45573_LW138R_2016, whole genome shotgun sequence 4,538
JALNXB010000101.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold46838_LW138R_2016, whole genome shotgun sequence 4,453
JALNXB010000102.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold48892_LW138R_2016, whole genome shotgun sequence 4,325
JALNXB010000103.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold63896_LW138R_2016, whole genome shotgun sequence 3,603
JALNXB010000104.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold64102_LW138R_2016, whole genome shotgun sequence 3,596
JALNXB010000105.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold66769_LW138R_2016, whole genome shotgun sequence 3,492
JALNXB010000106.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold69135_LW138R_2016, whole genome shotgun sequence 3,408
JALNXB010000107.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold71599_LW138R_2016, whole genome shotgun sequence 3,327
JALNXB010000108.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold72914_LW138R_2016, whole genome shotgun sequence 3,286
JALNXB010000109.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold82829_LW138R_2016, whole genome shotgun sequence 3,011
JALNXB010000110.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold92178_LW138R_2016, whole genome shotgun sequence 2,801
JALNXB010000111.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold92214_LW138R_2016, whole genome shotgun sequence 2,800
JALNXB010000112.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold97228_LW138R_2016, whole genome shotgun sequence 2,702
JALNXB010000113.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold100349_LW138R_2016, whole genome shotgun sequence 2,645
JALNXB010000114.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold100736_LW138R_2016, whole genome shotgun sequence 2,638
JALNXB010000115.1 MAG: bacterium isolate SO_2016_LW2 bin 85 scaffold106146_LW138R_2016, whole genome shotgun sequence 2,544

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory