fast.genomicscompare 6,575 genera of bacteria & archaea

 

JACKPQ01 sp024233435 HK-STAS-VERR_A-5

Genome identifier: GCA_024233435.1

NCBI assembly name: ASM2423343v1

GTDB taxonomy: Bacteria, Chlamydiota, Chlamydiia, Chlamydiales, JACKPQ01, JACKPQ01, JACKPQ01 sp024233435

NCBI taxonomy: Bacteria, Chlamydiota, Chlamydiia, Chlamydiales

Scaffolds: 11

Genes: 1,550 Protein-coding: 1,502 RNAs: 42 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
JACKPQ010000001.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_1, whole genome shotgun sequence 726,073
JACKPQ010000002.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_2, whole genome shotgun sequence 641,585
JACKPQ010000003.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_3, whole genome shotgun sequence 97,438
JACKPQ010000004.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_4, whole genome shotgun sequence 36,332
JACKPQ010000005.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_5, whole genome shotgun sequence 28,457
JACKPQ010000006.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_6, whole genome shotgun sequence 22,811
JACKPQ010000007.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_7, whole genome shotgun sequence 22,351
JACKPQ010000008.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_8, whole genome shotgun sequence 11,993
JACKPQ010000009.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_9, whole genome shotgun sequence 10,794
JACKPQ010000010.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_10, whole genome shotgun sequence 10,203
JACKPQ010000011.1 MAG: Chlamydiales bacterium isolate HK-STAS-VERR_A-5 HK-STAS-VERR_A-5_11, whole genome shotgun sequence 8,867

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory